| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1914 |
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| Symbol | ruvB |
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| ID | 4205513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2112595 |
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| End bp | 2113635 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642566464 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_699224 |
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| Protein GI | 110802636 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.881397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA GATTAGTTAC CTCTAATGAG ATTGGAATAG ATTCAACTAA TGAATACAGT
TTGAGACCAG AGAAAATAAA TGAATATATA GGTCAAGACA AAGTTAAAGA AAGATTAAAC
ATATTCATAA AAGCTGCTCA AAGAAGAGGG GAAGCCTTAG ACCATGTAAT TTTATATGGA
CCACCAGGTC TTGGAAAGAC AACATTAGCT AATATAATAG CAAATGAAAT GGGTGGAAAT
CTTAAAATAA CATCAGGGCC TGCTATTGAA AGAGCAGGAG ACTTAGCGGC GATATTAACA
ACCTTAAACA CTAATGATGT TTTATTTATT GATGAGATAC ATAGATTAAA TAGAAGTGTA
GAGGAAATAC TATATCCTGC CATGGAGGAT TATGTTTTAG ATATAATTAT TGGTAAGGGG
GCTGCTAGTA AATCCATAAG ACTCGATTTA CCTAAATTTA CTCTAATAGG TGCCACAACT
AGAATTGGTA TGCTTAGTTC ACCTTTAAGA GATAGATTTG GGGTTTTATG TTCTATGGAA
TATTATACTG ATGAGCAATT AAAGGAAATA ATAATTAGAA GTGCTGAAAT TTTAGGATGC
CATATAACTG AAGAAGGGGC CTTTGAAATT GCTAAAAGGT CAAGGGGTAC TCCTAGAATA
GCAAATAGAC TTTTAAAGAG AGTGAGAGAT TTTGCAGAAG TTTTATATGA TAATGAAATT
ACAGAAGAGG CTGCAAAAAA ATCCTTAGAG ATTTTAGAAG TTGATGGAGA AGGTTTTGAT
AGAATTGATA ATAAAATTCT AGAAGCCATA ATAGATAACT TCAATGGAGG ACCAGTAGGG
ATAGAAACCT TAGCTTACTT CGTTGGAGAG GAATTAGATA CTATAGAAGA TGTTTATGAG
CCATATCTTC TACAAAAAGG GTTTATAGTT AGAACTCCAA GGGGAAGAAT GGCAACAGAT
AAAGCGTATA AACACTTAGG AAGAGTTAGA TTTAATGAAT CTAAGATAGA TTCTAAACAG
TGTACGTTAT TTGAAAAATA A
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| Protein sequence | MSERLVTSNE IGIDSTNEYS LRPEKINEYI GQDKVKERLN IFIKAAQRRG EALDHVILYG
PPGLGKTTLA NIIANEMGGN LKITSGPAIE RAGDLAAILT TLNTNDVLFI DEIHRLNRSV
EEILYPAMED YVLDIIIGKG AASKSIRLDL PKFTLIGATT RIGMLSSPLR DRFGVLCSME
YYTDEQLKEI IIRSAEILGC HITEEGAFEI AKRSRGTPRI ANRLLKRVRD FAEVLYDNEI
TEEAAKKSLE ILEVDGEGFD RIDNKILEAI IDNFNGGPVG IETLAYFVGE ELDTIEDVYE
PYLLQKGFIV RTPRGRMATD KAYKHLGRVR FNESKIDSKQ CTLFEK
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