| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1909 |
|---|
| Symbol | |
|---|
| ID | 4204852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2108296 |
|---|
| End bp | 2109648 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642566459 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_699219 |
|---|
| Protein GI | 110802909 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00558063 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGTG GAGAGTATTA CGTAGTAGAC GTAAACTCAG GAAGTGTTCA TATTGTCGAT
GACCTTATTT ACAATATGAT AGATAATGAT AACAAATTAA GTAGTAAGGA ATCTTTAATT
GAAAAGTTAA AAGATAAATA TCCAGTTGAG GAAATTGAAG AGGCTTATGA AGATTTACTT
CAATTAGTAG AAGAAGACGC TTTATACTCA GGAGATTTAT ATGAAGAGGT TGCTAAAGAA
AGTGACAAGG CACCTTCATA TATAAAAGCT CTATGCTTAA ATGTTGTACA TGACTGTAAT
TTAAGATGTA AATATTGTTT CGCTGACGAG GGAGAATACA AAGGATGTAG AAAACCAATG
AGTGCTGAAG TTGGTAAAAA AGCTATTGAT TTTGTATTAG CAAATTCAGG TGGAATAAAG
AATATAGAAG TTGATTTATT TGGTGGGGAA CCACTAATGG TATTTGATAC TATAAAAGAA
ATAATAGATT ATGGTAAAAA AAGAGGACAA GAAGTAGGCA AAAATGTAAG ATTTACTATG
ACTACTAATG CAACTCTTTT AAATGATGAA AGAATCGATT ATATAGATAA AAACATCGGA
AATATAATTC TTTCAATAGA TGGAAGAAAA GAAGTTAACG ATGCTGTTAG AATAAGAGTT
GATGGTTCAG GAAGTTATGA TAGAATACTT CCAAACATAA AGAAAATGGT TGAAAAGAGA
GATCCAAGTA AACAATATTA TGCTAGAGGA ACATTTACAA GAAATAATAC TGACTTCTTC
CAAGATGTAA TGGCTCTTGC TAATGAAGGA TTTACTGAGA TTTCAATAGA GCCAGTTGTT
CTTCCAGATG AACATGAATT ATCTTTAAGA AGAGAAGATT TACCAACTAT ATTTGGAGAG
TATGATAAAT TATACAATGA AATGGTGAGA AGATTAGAAG AGGGAGATAA CATATTCAAA
TTCTATCACT TTAACATTGA TTTAAATGGT GGTCCTTGTG TTTATAAGAG AATAGCAGGA
TGTGGAGCAG GTCATGAGTA TATTGCTGTA ACTCCAGATG GAGAAATATA TCCATGTCAC
CAATTCGTTG GAAATACTGA TTTCTTACTA GGAAATATCT ATGATGGAGA AATCAGAAAA
GATCTTTCAA CAGAATTTAA ACAAGCTCAC ATATATAATA AGCCAAAATG TAAAGAATGC
TGGGCTAGAT TCTACTGTAG TGGTGGATGT CAAGCTAATA ACTTTAACTT TAATGGCGAT
ATTCATGTTC CTTATGAAGT TGGATGTGAA ATGCAAAAGA AAAGAATTGA GTGTGCTATT
GCATTAAAGT CAAAGACTAT GGACGCTGAA TAA
|
|---|
| Protein sequence | MQGGEYYVVD VNSGSVHIVD DLIYNMIDND NKLSSKESLI EKLKDKYPVE EIEEAYEDLL
QLVEEDALYS GDLYEEVAKE SDKAPSYIKA LCLNVVHDCN LRCKYCFADE GEYKGCRKPM
SAEVGKKAID FVLANSGGIK NIEVDLFGGE PLMVFDTIKE IIDYGKKRGQ EVGKNVRFTM
TTNATLLNDE RIDYIDKNIG NIILSIDGRK EVNDAVRIRV DGSGSYDRIL PNIKKMVEKR
DPSKQYYARG TFTRNNTDFF QDVMALANEG FTEISIEPVV LPDEHELSLR REDLPTIFGE
YDKLYNEMVR RLEEGDNIFK FYHFNIDLNG GPCVYKRIAG CGAGHEYIAV TPDGEIYPCH
QFVGNTDFLL GNIYDGEIRK DLSTEFKQAH IYNKPKCKEC WARFYCSGGC QANNFNFNGD
IHVPYEVGCE MQKKRIECAI ALKSKTMDAE
|
|---|
| |