Gene CPR_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1892 
Symbol 
ID4206577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2088980 
End bp2090503 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content28% 
IMG OID642566442 
Productsensor histidine kinase 
Protein accessionYP_699202 
Protein GI110801865 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAA GTATTTCAAA AAGATTATTT ATAATAACTT TTGGTATAAT AATATTCTTA 
ACCTTGTTTA CAATGATATT CCAAATTACA TTTTTCCAAG AATTTTATTA TAAAAGAAAA
AGTAATGATT TAAGCAATGC AGTTTTAAAG TTTAGAGCTC TATATTCTTA TGACATAAAA
AATACAGACT CTTTATATAG GGCTTTAAGC CTTTTTGAAC TTGAAAATAA CGCTAAAATA
GGAATTTATT CCATAGATAG TACACCAAAA TATGTTCCTG ATCCAGCTAA TAAAAACTCA
GAGGCTGTAG ATTTATTAAA CGATATTTTT AATGAGTTAT ATAGTGACCA AGATTTTGCA
AAAACCTTAT TAAATTCAAA TTCTGGAGTA ACTACAGAAT TTAAAAGCAG AAAATACTCA
ACAAAATATA TTGTTTATAT GGTGCCATTT TCTCTTAATT CTAAGAACGA TTCTATTATT
ATAGCCATAA CATCATTCCA AGCAATTGAA GAAGCAAGCG CCTTAATAAA GGATTTTTAT
AAATACATAA TTCTTATAGT CATAGTGATT GGATTAATTT TATCCTATGT ATTTTCAAAC
TTAATTTCTA AACCTCTAGT GAAATTAAAT AAATCTGCAA AGAAAATGAG TGCTATGGAC
TTCTCTGAAA AGTGTGATAT AGAACGTGAA GATGAAATAG GAAATCTAGC TAAAACTTTA
AACTTTTTGT CTAAAAATCT ATCTAATGCC TTAGATGATT TAAAAATAAA AAATAAAAAG
TTAGAAGAAG ATATAGAAAA AGAAAGAGAA CTAGAAAAAC TTAGAAAAGA CTTTATTGCT
GGAGCATCCC ATGAACTTAA AACTCCTATT GGTATAATAT CTGGATATGC TGAAGGAATA
AAAGACGGTA TAGTGGATCA TAAGGATCAA GGGGTTTACT TAGATATAAT TATAGATGAA
GCAGAAAAAA TGAACAAATT AGTTATGGAT ATGCTTGAAC TTTCAAAGCT TGAAGCTGGA
AAAATTGATT TACATATAAT AGATTTTTCC CTTACAGAAC TTACTGAGGA AGTTTTAGTA
AAGAATTCTG TTGAAATAAA TAAAAATAAT TTAACTGTAA TAAAAAACTA CTCTCCTACT
AACGATTTAT ATGTTCAAGG AGATGACTTT AAAATAGAAC AGGTACTAAC TAATTTTGTT
ACCAATGCTA TAAAATATTC TGAACCTAAC AACCAAATAA TAATAGATAT AAAGTCAGTT
GAGGAAGATA AAATCTACTT CTCAATTGGA AATACCGGCG CCCATATTCC TGATTCAGAT
ATAAATAAGA TTTGGACTCA ATTTTATAGG GGAGATACCT CAAGAAATAG AGGATCTAGA
AGTACTGGAC TTGGACTATC CATAGTTAAA AATCTACTTC AAGCTCATGA AAGTGAATTC
GGAGTTATGA ATACAGAAAA CGGGGTTAAA TTCTACTTTA CCCTAAAAAA ATCTAAAGAA
ATAGATGGCG TAGAAGAAAT CTAA
 
Protein sequence
MKKSISKRLF IITFGIIIFL TLFTMIFQIT FFQEFYYKRK SNDLSNAVLK FRALYSYDIK 
NTDSLYRALS LFELENNAKI GIYSIDSTPK YVPDPANKNS EAVDLLNDIF NELYSDQDFA
KTLLNSNSGV TTEFKSRKYS TKYIVYMVPF SLNSKNDSII IAITSFQAIE EASALIKDFY
KYIILIVIVI GLILSYVFSN LISKPLVKLN KSAKKMSAMD FSEKCDIERE DEIGNLAKTL
NFLSKNLSNA LDDLKIKNKK LEEDIEKERE LEKLRKDFIA GASHELKTPI GIISGYAEGI
KDGIVDHKDQ GVYLDIIIDE AEKMNKLVMD MLELSKLEAG KIDLHIIDFS LTELTEEVLV
KNSVEINKNN LTVIKNYSPT NDLYVQGDDF KIEQVLTNFV TNAIKYSEPN NQIIIDIKSV
EEDKIYFSIG NTGAHIPDSD INKIWTQFYR GDTSRNRGSR STGLGLSIVK NLLQAHESEF
GVMNTENGVK FYFTLKKSKE IDGVEEI