Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1892 |
Symbol | |
ID | 4206577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2088980 |
End bp | 2090503 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642566442 |
Product | sensor histidine kinase |
Protein accession | YP_699202 |
Protein GI | 110801865 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAA GTATTTCAAA AAGATTATTT ATAATAACTT TTGGTATAAT AATATTCTTA ACCTTGTTTA CAATGATATT CCAAATTACA TTTTTCCAAG AATTTTATTA TAAAAGAAAA AGTAATGATT TAAGCAATGC AGTTTTAAAG TTTAGAGCTC TATATTCTTA TGACATAAAA AATACAGACT CTTTATATAG GGCTTTAAGC CTTTTTGAAC TTGAAAATAA CGCTAAAATA GGAATTTATT CCATAGATAG TACACCAAAA TATGTTCCTG ATCCAGCTAA TAAAAACTCA GAGGCTGTAG ATTTATTAAA CGATATTTTT AATGAGTTAT ATAGTGACCA AGATTTTGCA AAAACCTTAT TAAATTCAAA TTCTGGAGTA ACTACAGAAT TTAAAAGCAG AAAATACTCA ACAAAATATA TTGTTTATAT GGTGCCATTT TCTCTTAATT CTAAGAACGA TTCTATTATT ATAGCCATAA CATCATTCCA AGCAATTGAA GAAGCAAGCG CCTTAATAAA GGATTTTTAT AAATACATAA TTCTTATAGT CATAGTGATT GGATTAATTT TATCCTATGT ATTTTCAAAC TTAATTTCTA AACCTCTAGT GAAATTAAAT AAATCTGCAA AGAAAATGAG TGCTATGGAC TTCTCTGAAA AGTGTGATAT AGAACGTGAA GATGAAATAG GAAATCTAGC TAAAACTTTA AACTTTTTGT CTAAAAATCT ATCTAATGCC TTAGATGATT TAAAAATAAA AAATAAAAAG TTAGAAGAAG ATATAGAAAA AGAAAGAGAA CTAGAAAAAC TTAGAAAAGA CTTTATTGCT GGAGCATCCC ATGAACTTAA AACTCCTATT GGTATAATAT CTGGATATGC TGAAGGAATA AAAGACGGTA TAGTGGATCA TAAGGATCAA GGGGTTTACT TAGATATAAT TATAGATGAA GCAGAAAAAA TGAACAAATT AGTTATGGAT ATGCTTGAAC TTTCAAAGCT TGAAGCTGGA AAAATTGATT TACATATAAT AGATTTTTCC CTTACAGAAC TTACTGAGGA AGTTTTAGTA AAGAATTCTG TTGAAATAAA TAAAAATAAT TTAACTGTAA TAAAAAACTA CTCTCCTACT AACGATTTAT ATGTTCAAGG AGATGACTTT AAAATAGAAC AGGTACTAAC TAATTTTGTT ACCAATGCTA TAAAATATTC TGAACCTAAC AACCAAATAA TAATAGATAT AAAGTCAGTT GAGGAAGATA AAATCTACTT CTCAATTGGA AATACCGGCG CCCATATTCC TGATTCAGAT ATAAATAAGA TTTGGACTCA ATTTTATAGG GGAGATACCT CAAGAAATAG AGGATCTAGA AGTACTGGAC TTGGACTATC CATAGTTAAA AATCTACTTC AAGCTCATGA AAGTGAATTC GGAGTTATGA ATACAGAAAA CGGGGTTAAA TTCTACTTTA CCCTAAAAAA ATCTAAAGAA ATAGATGGCG TAGAAGAAAT CTAA
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Protein sequence | MKKSISKRLF IITFGIIIFL TLFTMIFQIT FFQEFYYKRK SNDLSNAVLK FRALYSYDIK NTDSLYRALS LFELENNAKI GIYSIDSTPK YVPDPANKNS EAVDLLNDIF NELYSDQDFA KTLLNSNSGV TTEFKSRKYS TKYIVYMVPF SLNSKNDSII IAITSFQAIE EASALIKDFY KYIILIVIVI GLILSYVFSN LISKPLVKLN KSAKKMSAMD FSEKCDIERE DEIGNLAKTL NFLSKNLSNA LDDLKIKNKK LEEDIEKERE LEKLRKDFIA GASHELKTPI GIISGYAEGI KDGIVDHKDQ GVYLDIIIDE AEKMNKLVMD MLELSKLEAG KIDLHIIDFS LTELTEEVLV KNSVEINKNN LTVIKNYSPT NDLYVQGDDF KIEQVLTNFV TNAIKYSEPN NQIIIDIKSV EEDKIYFSIG NTGAHIPDSD INKIWTQFYR GDTSRNRGSR STGLGLSIVK NLLQAHESEF GVMNTENGVK FYFTLKKSKE IDGVEEI
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