Gene CPR_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1888 
Symbol 
ID4205339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2085145 
End bp2086320 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content28% 
IMG OID642566438 
Producttransglutaminase domain-containing protein 
Protein accessionYP_699198 
Protein GI110802849 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTA ACTTAGTAGA TATAATTATA GTTTGTTCTT TTATACTACC ATTAGTAGTT 
GCTTACAAAA GAAAGTTTAA TATTATTAGA ATAAAAAATA GTATAGAGGA ATTAGGAGGA
TATATATCCT TTTTTCTTGC TTTATACTTA AGTTTTATAG CTATAAAAAA GATAGATATA
ATAGAGAGGA TGTTTTCAAT TGTAGTTGTT GAACTAAATA ATATTATAGC TAACTTTAAT
ATTTCACCAA AGGTTATAAT AATATTCATA GTATTAGCTC TTACCCTTGT AATTTATTTT
ATAGTAAAAG TTATACTTAA AATATTTAGT TTTATTATTA TAAATCCAAT ACTTAGATGG
TTAAAAAAAG CAGAGTCTAG AAGGGGTAAG GGATTTGGTA AAGTTGCAGC CTTAATAATA
AATATACCAA AGTCTCTTTT TTATATGGCA GTAATTGCTT TAGTCATAGT TATTCTAGGA
AGCAATGGTT TCTTAGGAGA GAAAATACAA GGCATGACTT TAGCTTCAAA GGCTTATGAG
GTTATAAATA GTAATAAGTA CTATGCTGCT TTAAATAAAG AATATGAAGC TTTTCATGAT
GAATATAAAG ATGTTATTAG CAAAAACATA GATTCTACAG TTGAAAGTAA TAAAGAGCCA
AAGAGTGAAA AAGTGTTTGA AAGTAATAGA AATGTTATAA ATCTTTATAA TGGTGTAACT
TTAGAACAAG GTATAAAATC AAACGAAGCT ATTAATAGAA AAGCTAAGGA ACTTACTAAA
AATGCAAAAA GTAGTAGAGA AAAAGCTAAA AGAATATATA CTTGGATAAG TGAAAATATT
AATTATGATG ATAATAAAGC TGAAAATATA AGCGAGAAAA CTTCTGAGTA TAAGTCTGGT
GCTATTGAAG CCTTTGAAAC TAGAAAAGGA ATATGCTTTG ATTATTCTTG TCTTTATGTT
GCTATGGCAA GAGAAGCGGG ACTTAAAGTT AGAATTGTAA CTGGAGAAGG ATTCAATGGA
AAGGAATGGG GACCACATTC TTGGAATGAG GTCTATTTAC CAGAAAAAAA TCAATGGATA
ACTGTTGATC CTACCTTTGG TAAAGCTGGA AACTATTTTG ATAGCAAAAA AAATAGTGAA
TCACACAGAG ATGGAAAAAT AGTTGGTGAA TGGTAA
 
Protein sequence
MNFNLVDIII VCSFILPLVV AYKRKFNIIR IKNSIEELGG YISFFLALYL SFIAIKKIDI 
IERMFSIVVV ELNNIIANFN ISPKVIIIFI VLALTLVIYF IVKVILKIFS FIIINPILRW
LKKAESRRGK GFGKVAALII NIPKSLFYMA VIALVIVILG SNGFLGEKIQ GMTLASKAYE
VINSNKYYAA LNKEYEAFHD EYKDVISKNI DSTVESNKEP KSEKVFESNR NVINLYNGVT
LEQGIKSNEA INRKAKELTK NAKSSREKAK RIYTWISENI NYDDNKAENI SEKTSEYKSG
AIEAFETRKG ICFDYSCLYV AMAREAGLKV RIVTGEGFNG KEWGPHSWNE VYLPEKNQWI
TVDPTFGKAG NYFDSKKNSE SHRDGKIVGE W