| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1876 |
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| Symbol | |
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| ID | 4205119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2071025 |
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| End bp | 2071735 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642566426 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, putative |
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| Protein accession | YP_699186 |
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| Protein GI | 110803096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
[TIGR03532] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000883731 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATA ACTTTACAGA TCCATATGAA ATTGCTAGAT TCATAAAGGA AGTAAAAAAA
TCAACTCCTG TTAAAGTTTA TCTTAAAGGT AACTTAGAAG GTGTAGAATT AGGTTCAATA
GAGTGTTATG GAAATAATGA TTTCTATGTA TTATTTGGAG AAAGTGATGA AGTTGCTACT
TTCTTAACAG AAAATAAAGA TAAAATAGTA AGCTTTAGAC TTGAAAATGA TAGAAGAAAC
TCAGCTATTC CAATGTTAGA ACTTTTAAAC ATAAACGCTA GAATCGAACC TGGCGCAATA
ATAAGAGACA GAGTATCAAT CGGAGACAAC GCTGTTATAA TGATGGGTGC TGTCATAAAC
ATAGGGGCTG AAATAGGTGA AAGTACAATG GTAGATATGA ACGCTGTAAT AGGTGCTAGA
GGAAAACTTG GAAAAAGAGT TCACTTAGGT GCTGGCGCTG TTGTTGCTGG AGTTTTAGAA
CCACCTAGCA AAACTCCATG TATAATAGAA GACGATGTTT TAATAGGAGC TAATGCAGTT
ATCCTTGAAG GTGTTAAAAT TGGAAAAGGC TCAGTTGTAG CTGCTGGATC AGTGGTAGTT
GAAGATGTAC CAGCTGGCGT AGTTGTAGCT GGAACTCCTG CTAAAATTAT TAAATCTGTT
GATGAAAAAA CTAAAGATAA AACAGAAATA TTAGATGATT TAAGAAAATA A
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| Protein sequence | MSYNFTDPYE IARFIKEVKK STPVKVYLKG NLEGVELGSI ECYGNNDFYV LFGESDEVAT
FLTENKDKIV SFRLENDRRN SAIPMLELLN INARIEPGAI IRDRVSIGDN AVIMMGAVIN
IGAEIGESTM VDMNAVIGAR GKLGKRVHLG AGAVVAGVLE PPSKTPCIIE DDVLIGANAV
ILEGVKIGKG SVVAAGSVVV EDVPAGVVVA GTPAKIIKSV DEKTKDKTEI LDDLRK
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