| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1859 |
|---|
| Symbol | ytxC |
|---|
| ID | 4206449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2058958 |
|---|
| End bp | 2059836 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 21% |
|---|
| IMG OID | 642566409 |
|---|
| Product | putative sporulation protein YtxC |
|---|
| Protein accession | YP_699173 |
|---|
| Protein GI | 110801778 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02834] putative sporulation protein YtxC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000476636 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCTAA TGACATTATG TTGTGAGGAT GAAAAAAATT TAATAAAAGA CATGCAGAAT
ATAAAAAATG TTTTAAAGAG TAAAGGTATT ATAATTGGTG TGTCAGAAAG TATCTCATAT
GGAACTCACT TCGTTAAAAT ATACTATGGA AATAGTGAAT TTGATGAAAA TATGAGAGCT
ACTATAATGT TATATATAAG TAATGTTATT TATAATGTTA TAGTAGAACA TTATAGAGAA
AAAGAAATGC TTCATTATAT AAATGAAAAT TATTTCTTTT TAAAACATGA TGAAATATTA
GATATTGATT TAGCTATAAA TAAAATATTA AAAGGAGATC AAAAGATTTG TTCAGATAAA
GATTTTTATT GTTTAAATAA GATAAATGAT ATTATAGAGA ATATAAAAGA ATTCATATTA
GAAAATGATT ATGTAAACAT AGAAGGTTTT ATAACTTTTA GAATGAAAAA TTTTTTAAAG
GATATAGAAT GTATTATAGA TAAAGTAGTA GAAGATTATA TGATTGAAAA AGAATATAAT
GAATTCATAA AGCTATTAAA GTATTTTGTA GATATACAAG ATTGTAAATT AGAAGAAGTA
AATATAATAG TTCAAAAAAA TGGATCTTAT GAGGTTAAAG ATTCTAAGGG ACTTGATATC
TTTAAGGATT TTTTAAATGA AATTACAGAT GCTGCTGAAG TAGGAATAAT AAATACAGAA
GATATTATTA TTAGTGGTTT AATAACTAAT GTACCTAAAA AAATAAAAAT ATATAATGAA
GAATATTGTA TTAATAAAGA ATTTATTCAG ACTATAAAAA GTGTCTTTGG TGAAAGAGTA
GAAACCCATA GAAGTTACAA TAATATTTTA AAAAAATAA
|
|---|
| Protein sequence | MLLMTLCCED EKNLIKDMQN IKNVLKSKGI IIGVSESISY GTHFVKIYYG NSEFDENMRA
TIMLYISNVI YNVIVEHYRE KEMLHYINEN YFFLKHDEIL DIDLAINKIL KGDQKICSDK
DFYCLNKIND IIENIKEFIL ENDYVNIEGF ITFRMKNFLK DIECIIDKVV EDYMIEKEYN
EFIKLLKYFV DIQDCKLEEV NIIVQKNGSY EVKDSKGLDI FKDFLNEITD AAEVGIINTE
DIIISGLITN VPKKIKIYNE EYCINKEFIQ TIKSVFGERV ETHRSYNNIL KK
|
|---|
| |