Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1841 |
Symbol | |
ID | 4206473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2032005 |
End bp | 2033732 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566391 |
Product | phosphomannomutase |
Protein accession | YP_699155 |
Protein GI | 110802226 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.354389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATAGAG AAAAATATGA AGAATGGCTA AATTCTGATA TTATTTCTGA GGAAATAAAG GCGGAATTAA GAGACGTAAA AGAAGATAAG GAAATAGAAG ATAGATTTTA TAAGGAATTA GATTTTGGTA CTGGTGGATT AAGAGGTGTT ATTGGTGCTG GGACTAATAG AATGAATATC TATACTGTAG GAAAAGCTAC TCAAGGATTT GCAGATTATT TAAATGATAA TTATGCGGGG GAAAAATCTG TTGCAATAGC TTATGACTCA AGAAATATGT CTAAGGAGTT TGCAAAAGCG GCTGCTTTAA CTCTTTGTGC AAATGGAATA AAGGTTAATC TTTTTGAGTC TTTAAGACCT ACTCCAATGT TATCCTTTGC AGTAAGAGAA TTAAATTGTA AGGGTGGTAT TGTTATAACA GCATCACATA ATCCAAAACA ATATAATGGA TATAAAGTTT ATGGAGATGA TGGATGTCAA TTAACAGATG CGCCTGCAAA AGCTGTTATT GGATATGTTA ACAAAGTTAC AGATTACGCA AACATAAAGA CAATGAGTGA AGAAAAGGCT TTAGAAGAAG GACTTTTAGT TTATATTGGT GAAGAAATAG ATAAAAAATA TATAGATGAT TTAAAAACTT TAACTATAAG AGAAGATTTA GTTAAGAAAC ATGCTAAAGA TTTAAAAATA ATTTATACTC CAATTCATGG TTCAGGAAAT GTTCCTGTAA GAAGAATATT AAAAGAGTTA GGATATGAGA ATGTATTTGT TGTTAAAGAA CAAGAAATGC CAGATGGAAA TTTCCCAACA GCTCCATATC CAAATCCAGA AGATCCAAAG GTATTTAAAT TAGCTTTAGA CATGGCTAAA GAAATTCAAC CTGATATAAT ATTTGGAACA GATCCAGACT GTGATAGAAT AGGTGTTGTT GTTAAAGACA ATAATGGAGA GTACCAAGTA TTAAGTGGTA ACCAAACAGG AATGTTACTA ACTAACTATA TATTAAGTTC ATTAAAGGAA ATGAACAAAT TACCTAAAAA TGGTGTAGTT ATAAAAACTA TAGTTACTAC AGAGTCAGTA AGAAAAATGA CTGAGGAATA TGGGGTAACT TTAATAGATA CATTAACAGG ATTTAAATAT ATAGGTGAAA AGATAAGAGA ATTTGAAGAA TCAGGTTCAA ATGAATATTT ATTTGGTTTT GAAGAAAGCT ATGGTTACTT AGCCGGAACT TTTGCTAGAG ATAAGGATGC TGTTGTAGCT TCAATGTTAA TAGCTGAAAT GACTTTATAT TATAAAGAAC AAGGAAAAAC TCTTTATGAT GGTTTAATAG AACTTTATAA TAAATATGGT TACTTCAAAG AAAGCTTAGT ATCAATAGAG CTTGCAGGAA AAGAAGGACA AGAACAAATA GCTAAGTGTA TAGATGGCTT AAGAAATGAT GCTTTAAAAG AAATGAATGG AGTTAAAGTT ATTACATCTT TCGATTATAA GTTAAGCAAA GAAGTAAATA ACTTAACTGG AGAAGAAAAA GAAGTAAAAC TTCCAAAATC AAATGTTTTA AAATATGTTT TAGAAGATGA TTCTTGGTTT GTTGTAAGAC CATCAGGTAC AGAGCCTAAG ATGAAAATCT ACTTATCAGT AAAAGGTTCA AGCTTAGAAG ATTCAAAAGA AAAAACTGAA AACTTTAAAA ATGCAATAAT GGAAGTAATT AATGCTAAAT TAAAATAG
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Protein sequence | MYREKYEEWL NSDIISEEIK AELRDVKEDK EIEDRFYKEL DFGTGGLRGV IGAGTNRMNI YTVGKATQGF ADYLNDNYAG EKSVAIAYDS RNMSKEFAKA AALTLCANGI KVNLFESLRP TPMLSFAVRE LNCKGGIVIT ASHNPKQYNG YKVYGDDGCQ LTDAPAKAVI GYVNKVTDYA NIKTMSEEKA LEEGLLVYIG EEIDKKYIDD LKTLTIREDL VKKHAKDLKI IYTPIHGSGN VPVRRILKEL GYENVFVVKE QEMPDGNFPT APYPNPEDPK VFKLALDMAK EIQPDIIFGT DPDCDRIGVV VKDNNGEYQV LSGNQTGMLL TNYILSSLKE MNKLPKNGVV IKTIVTTESV RKMTEEYGVT LIDTLTGFKY IGEKIREFEE SGSNEYLFGF EESYGYLAGT FARDKDAVVA SMLIAEMTLY YKEQGKTLYD GLIELYNKYG YFKESLVSIE LAGKEGQEQI AKCIDGLRND ALKEMNGVKV ITSFDYKLSK EVNNLTGEEK EVKLPKSNVL KYVLEDDSWF VVRPSGTEPK MKIYLSVKGS SLEDSKEKTE NFKNAIMEVI NAKLK
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