| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1840 |
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| Symbol | |
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| ID | 4204167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2030616 |
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| End bp | 2031713 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642566390 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_699154 |
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| Protein GI | 110803525 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00013398 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTA ATACATTTGC AAAAGAAAAA TTATCACAAC TTTTATTTTT AGAAATAGAT
GGAGATGGAT TTGTTAAAAG CTTAGGAAAA GATCCAAAAG AGGTTAATAT AAATGAAGTT
TATATCCCAA TAGATCCAAA ACATTTATCA CAGGATGTGA AAAGTGGATA TAAATTAGAA
TCTTTACCAA TAAACTATTT AGTTGAAGGA ATGTTTTTCG CTTTAGGGGG AGACAAGGAT
TTTAAATTTA ATAAGGAGTA TAAAAAATTA ATTCCACTAA TAGAGGATGC TATTCCATGT
GTTAAAAAGA TAGTAGCTGA TAAGGTTAAA GAAGAAAATA TGGTTGAAGC ATTTATGCTT
TTAAAGGGAT TAAGCGAAAT ATCAGATGAA ACTGAGGTTT ATGAAAATCT TCTTTTAATA
TGTGAATCTT TAAGAGAAAG AAATAAAGCT TATAATGAAA CTCAACTAGA AATTTGTGAT
AAATGTAAAG CAAATAGAAG TGATTTAGCT CTTCCATATC TTTATTCAGC AATAGCTTAC
AATGACATTG GGCAATATGA TAAAGCTTAT GTTGATATAA ATGAATATTT AGCTAAGGGT
GGAGAAAGAA ATGAAATAGT TGAGGTTTTA TATAATGAGA TAAAAGACTC AGCTGATTAT
GAAGAAGGAA AAGAAGATTT AATAGAAGAA CCAGAGGATG CTTTAAAAAG ACTTCTTCCT
TTAGCAGATA AATTCCAAGA TAATGCTATT TTAAGATATT ATATTGCAAC AGCTTATAGA
AGACTTGGAA ATTTTGAAAA GGCAGTTTAT TACTTAAATG AATGTTTATC AATTGATGAT
AGTATAGTTG AAGCAGTAAA TGAAATGGGA ATAAATTATG CATCTTTAGG AATATATGAT
GAAGCTATTA AATATTTAAG AAAAGCCTTT GAAAGCACAA GAGATATAGA GGTTTGTACT
AACTTAATAG TTTGTTATTT AAATGCAGGA AAAATAGAAG AGGCAAAGCA GCATTTAGAT
ATAGCAAAGG CTATAAACAA GGATGATGAA ATAGTAAAAG AAATAGAAAC ATTTATGAAA
AATAATAATA TTAAATAG
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| Protein sequence | MSFNTFAKEK LSQLLFLEID GDGFVKSLGK DPKEVNINEV YIPIDPKHLS QDVKSGYKLE
SLPINYLVEG MFFALGGDKD FKFNKEYKKL IPLIEDAIPC VKKIVADKVK EENMVEAFML
LKGLSEISDE TEVYENLLLI CESLRERNKA YNETQLEICD KCKANRSDLA LPYLYSAIAY
NDIGQYDKAY VDINEYLAKG GERNEIVEVL YNEIKDSADY EEGKEDLIEE PEDALKRLLP
LADKFQDNAI LRYYIATAYR RLGNFEKAVY YLNECLSIDD SIVEAVNEMG INYASLGIYD
EAIKYLRKAF ESTRDIEVCT NLIVCYLNAG KIEEAKQHLD IAKAINKDDE IVKEIETFMK
NNNIK
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