Gene CPR_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1828 
SymbolmraY 
ID4204599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2017370 
End bp2018341 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content30% 
IMG OID642566378 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_699143 
Protein GI110802408 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTT TAAAGTCAAT GATAGATCCA AAGATAGTAA TGGCAATAGT AATAAGTTTT 
ATAGTAGCAT CAATATTAGG ACCTATTATA ATTCCACTAC TACATAAACT TAAATTTGGA
CAAAATATAA GACAAGAGGG ACCAAAGAGT CACTTAAAAA AAGCAGGAAC TCCAACTATA
GGTGGATTGA TATTTATTTT TGCAACTATT ATAACAATGT TTGTTATGGT TGGAAATCCA
ACAGATGAGG CTATGATAGC TTTATATTCC TTCGTAGGAT TTGGTTTTGT AGGATTTTTA
GATGACTTAC TAAAGATAAT TAAGAAGAAA AATGAAGGAT TAACATCAGG ACAAAAAATG
ATTTTATTAT TAATAATATC AGGATTTTTA ACTTGGTATG CTTATAAATA TATAGGAACT
AGCATTAATA TACCATTTTT AAATGGGCAA ATTAACTTAG GATTATTCTA TATACCGGCT
GCAATGTTCT ACTTTGCAGG GGTAACAAAT GCGGTAAACT TAACAGATGG ATTAGATGGA
TTAGCTACAT CAGTTACTGT TTTAGTAACT ACATTTTTAG GGATAATTAG TTATAATTTA
GGACACATAA GTTTAGCAAT ATTCTGTGTT GCTTTAGCAG GTGCATTACT TGCCTTCTTA
AGATTTAATG CATTCCCAGC TAGAGTATTT ATGGGAGATA CAGGTTCTCT TGCTTTAGGA
GGAGCTGTAG CGATGGTGGC ATTAATATTA AAAATGCCTT TAATACTAGT GTTAATAGGA
ATTATCTATG TAATAGAAAC ACTTTCAGTT ATATTACAAG TTGCTTCATT CAAGCTTACA
GGTAAGAGAA TATTTAAAAT GGCACCTATA CATCACCATT TTGAACAATT AGGTTGGAGT
GAGACAAAGA TAGTTTCTGT ATTTTCTATA ATAACAGTAG TATTTTGCTT CATTGCTTTT
GCTTCACTTT AG
 
Protein sequence
MEILKSMIDP KIVMAIVISF IVASILGPII IPLLHKLKFG QNIRQEGPKS HLKKAGTPTI 
GGLIFIFATI ITMFVMVGNP TDEAMIALYS FVGFGFVGFL DDLLKIIKKK NEGLTSGQKM
ILLLIISGFL TWYAYKYIGT SINIPFLNGQ INLGLFYIPA AMFYFAGVTN AVNLTDGLDG
LATSVTVLVT TFLGIISYNL GHISLAIFCV ALAGALLAFL RFNAFPARVF MGDTGSLALG
GAVAMVALIL KMPLILVLIG IIYVIETLSV ILQVASFKLT GKRIFKMAPI HHHFEQLGWS
ETKIVSVFSI ITVVFCFIAF ASL