Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1824 |
Symbol | |
ID | 4205069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2014235 |
End bp | 2014573 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566374 |
Product | small basic protein |
Protein accession | YP_699139 |
Protein GI | 110801711 |
COG category | [S] Function unknown |
COG ID | [COG3856] Uncharacterized conserved protein (small basic protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0213812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTAT TTATTGGGCT TTTAGTAGGT ATAATAATAG GAGTTATATT TCCAGGAAGC ATACCAGATA AGTTTTCCCC ATATTTATCT ATAGCCATAG TTGCATGCTT AGATTCTGTT TTTGGAGCTA TAAAGGCAAG TTTAAAGAAA GAATTTCAAG CTGATGTTTT TATATCAGGA TTCTTTGGCA ATGCAGCTTT AGCAGCTTTA TTAGCTTATC TAGGTGATAA GCTTGGAATA CCACTATACT TTGCAGCTGT AATAGTATTT GGTAGTAGAA TATTTAATAA CTTTGCAGCT ATAAGAAGGA TATTGTTAGA CAAAAGCAAA GAACGATAA
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Protein sequence | MIVFIGLLVG IIIGVIFPGS IPDKFSPYLS IAIVACLDSV FGAIKASLKK EFQADVFISG FFGNAALAAL LAYLGDKLGI PLYFAAVIVF GSRIFNNFAA IRRILLDKSK ER
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