Gene CPR_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1824 
Symbol 
ID4205069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2014235 
End bp2014573 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content32% 
IMG OID642566374 
Productsmall basic protein 
Protein accessionYP_699139 
Protein GI110801711 
COG category[S] Function unknown 
COG ID[COG3856] Uncharacterized conserved protein (small basic protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0213812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTAT TTATTGGGCT TTTAGTAGGT ATAATAATAG GAGTTATATT TCCAGGAAGC 
ATACCAGATA AGTTTTCCCC ATATTTATCT ATAGCCATAG TTGCATGCTT AGATTCTGTT
TTTGGAGCTA TAAAGGCAAG TTTAAAGAAA GAATTTCAAG CTGATGTTTT TATATCAGGA
TTCTTTGGCA ATGCAGCTTT AGCAGCTTTA TTAGCTTATC TAGGTGATAA GCTTGGAATA
CCACTATACT TTGCAGCTGT AATAGTATTT GGTAGTAGAA TATTTAATAA CTTTGCAGCT
ATAAGAAGGA TATTGTTAGA CAAAAGCAAA GAACGATAA
 
Protein sequence
MIVFIGLLVG IIIGVIFPGS IPDKFSPYLS IAIVACLDSV FGAIKASLKK EFQADVFISG 
FFGNAALAAL LAYLGDKLGI PLYFAAVIVF GSRIFNNFAA IRRILLDKSK ER