Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1823 |
Symbol | |
ID | 4205288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2013491 |
End bp | 2014222 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642566373 |
Product | hypothetical protein |
Protein accession | YP_699138 |
Protein GI | 110802101 |
COG category | [S] Function unknown |
COG ID | [COG3879] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00133406 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAATA GAGAATTTAC TATTTTTATA TTTACGGCTT CAGTTATAGT TGGACTTTTA ATATCTATGA ACATAAGTTT TGATGGAATA GAAACTACAA AGGTGTTAAA TGCTAAGGAA TATCAAGATG CATATAATAA ACGCAATAAT CTTTATAATG AAATATCAAA GCTAAATGAA AGTAATAGAG AATTACAAAA GAAGATAAAT AATTATTCAA AAAATGATGA GGATAGCAAT AAAATTTCAA AGGATATGAT AGAAGAGTTA AATAATAATT TAATGCTTTC TGGATTAGAA GAGGCTAAAG GACCAGGTTT AAAAATAGTT TTAGAAGATG GTGGAGAAGC TTTTAGTGGA GAAGTTGTTG ATGATTTTAT GAGACTTTTA AGAACCATTC ATGATGATGA TATGATAAAA GTTATAAATG AACTTAAAGC TGCAGGTGCA GAGGCAATAT CTATAAATAA TCAAAGAATA ATATATAACA CAGAGATATA TTGTGGAGGT CAATTTTTAC GAATGAATGG AGTTAAAATC CCAGCTCCTT TTTATGTTAA TGTTATAGGT GATCCTGAAA AAATGGAGAA TCAAATTATG AGAGATGGAA GTTATATTAA AACTCTTATA AATAGAGGAA TAAAGGTTAA AATAACTAAG AGTGAAGATA TAACTATACC AGCATATATA AGTGATGTGA ATTCTAAGTA TATGGAACCT AATACAAAAT AA
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Protein sequence | MKNREFTIFI FTASVIVGLL ISMNISFDGI ETTKVLNAKE YQDAYNKRNN LYNEISKLNE SNRELQKKIN NYSKNDEDSN KISKDMIEEL NNNLMLSGLE EAKGPGLKIV LEDGGEAFSG EVVDDFMRLL RTIHDDDMIK VINELKAAGA EAISINNQRI IYNTEIYCGG QFLRMNGVKI PAPFYVNVIG DPEKMENQIM RDGSYIKTLI NRGIKVKITK SEDITIPAYI SDVNSKYMEP NTK
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