Gene CPR_1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1814 
SymboldapF 
ID4204553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2005370 
End bp2006188 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content31% 
IMG OID642566364 
Productdiaminopimelate epimerase 
Protein accessionYP_699129 
Protein GI110803272 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTT CAAAAATGCA TGGAAATGGA AATGATTTTA TAGTTATAGA AGATTTAAAC 
AATGAGTATT TAGGTAAAGA GGGAGAAATT GCTCAAAAAA TGTGCCATAG AAGATTTGGA
ATTGGTGCAG ATGGGATTTT AATAGTTAGA AAGAATGAAA ATTGTGATAT AGAAATGGTA
ATAATAAATT CAGATGGATC TTATGCTGCT ATGTGCGGAA ATGGAATAAG ATGTTTTGCT
AAGTATGTCT ACGAGAAGGG AATAGTAAAG AAAGATGTGC TAGATGTTTT AACAGGTGAT
GGAGTTAAAA GAATCTTTTT AGAAATTGAG AATGATAAGG TAAAAACTAT CAATGTAAAT
ATGGGATTTG GAGACTTTAA ACCAAAGAAT ATTCCAGCAT TATGTGATGA AGAAATAATA
GAAAAAAAAG TAAGTGTAGG AAATGGAAAT TTTGAAATAA CATCTTTACT TATGGGTGTT
CCTCATACTA TTATATTTGA GGAGGAAAAA TATCCTATAG AATGTGGTAA GGATATAGAA
AAGTACGAGT TATTTCCTCA AGGAACAAAT GTTAATTTCT GCAAAGTAAT TGATAGAAAT
ACAATGGAAG TTAGAACCTG GGAAAGAGGT GCAGGTCCAA CCTTAGCATG TGGAACAGGA
AATTGTGCTT CAGTTATAGC TGCTAATAAA TTAGGTCTTG TAGATAAAGA AGTAAAGGTA
ATAGTTCCTG GTGGAGAATT AAAAGTTAAT ATTGAAGATG ATGGAGTAAA AATGATAGGT
AATGCGTCAT TTATTTGTGA TGGCACATAT TTATTTTAG
 
Protein sequence
MKFSKMHGNG NDFIVIEDLN NEYLGKEGEI AQKMCHRRFG IGADGILIVR KNENCDIEMV 
IINSDGSYAA MCGNGIRCFA KYVYEKGIVK KDVLDVLTGD GVKRIFLEIE NDKVKTINVN
MGFGDFKPKN IPALCDEEII EKKVSVGNGN FEITSLLMGV PHTIIFEEEK YPIECGKDIE
KYELFPQGTN VNFCKVIDRN TMEVRTWERG AGPTLACGTG NCASVIAANK LGLVDKEVKV
IVPGGELKVN IEDDGVKMIG NASFICDGTY LF