| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1812 |
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| Symbol | |
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| ID | 4206542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2002833 |
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| End bp | 2004221 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566362 |
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| Product | pilus biogenesis protein, putative |
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| Protein accession | YP_699127 |
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| Protein GI | 110801793 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.956983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATA CCATTAAAGA TATAGATATG AAGCTAATGG AGAATATATC TAAGAATACA
GCTTTAGAGA TGAACTTAAT TGCCTTAAAA GAAAGTTCAG GTAAGATATT TTTTTATACA
AGCAAGGAAG AATCGAAGAA AAGGGAGTAT TTATCCTTAT TATTTAGAGA AAAAGAAATA
AACTTTGTAA TTGGAAATAA GGCTGAAATA GAAATTTTAA TTGAAGATTG TTATGGTGGA
AAAAGTTTTT CTAAGGATAA ATTTATTGAG GAAGAATTAA TAAGCCTTAT ATCTTTAGGT
ATAGAAAAAA ATACTAGTGA TATTCATATT GAACCCTTAG AAGAATATGC TAACATTCGC
TTTAGAATAG ATGGAACTTT AGTTTTAGTT AAGAGAATAA AGAAAAATCT TTATGAAAAT
TTAGTAAATA AGATAAAGTT AAAAGCTGAT ATGGATATAA GCGATAAATT AAGATGCCAA
GATGGGAAGG TGTCATTTAA AAATTATGGG TATGATTGTG ACTTAAGAAT ATCAAGTATT
CCAAGTACTT TTGGTGAAAA GTTAGTAGTT AGAATTTTAT ATAAGAAAAA TGAGCTTATG
AATATTGATA ATTTGAGTTT AATTGAAGAA CAAAAGAATA AAATAAATAA ACTTTTAAAA
TTAAAACACG GAATGGTGGT TATAAATGGT CCTACAGGAA GTGGAAAATC AACAACTCTA
TATGCATTAT TAAATTCAAT AGACAAGGAA GGGATAAATA TAAGCACCAT AGAAGATCCT
GTTGAGTTTA CCATAGAAGG AATAACACAA ACAAATGTTA ATGATAAGGT TGGATTAACC
TTTGCTAATG GATTAAAGCA TATATTAAGA CAGGACCCTG ATGTTATATT AATTGGAGAA
ATAAGAGATG AGGAAACGGC TAAAATTGCC ATAAGAGCTT CTATAACAGG GCATAAAGTA
TATTCAACAA TACACGCTAA CAGTGGTAAT GAAGTTTTTA ACAGATTATT AGATATGGGA
GTAGAAGGAT ATTTAGTAAA GGAAGGAGTA AGTTCAATAA TAACTCAAAG ATTAGTAAGA
AAAATTTGTG AAAAGTGTAA AGTGAAAATA GAGCTTAAAA ATGAACTAGT TGAGAAATTA
AAAGAGGAAG AGTTAAGTTT AAAAGCTTAC TATAAAGGAA CTGGATGTGA AATGTGTAAT
TGGACAGGTA ATAATGGAAG AAAAGCAATT TGTGAAATTA TATTTCCAAG AGAATATAAA
AGCACAGAGG ATATTACATG GGGAGAAGAA CTATTAAAGG CATGCTTTAC CTTAGTTAAA
AATGGAGAAA TATCTTTAGA AGAATATTAC TTATTAAAAG AATGTGAGGG GTTAGATGTT
TGGTTTTAA
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| Protein sequence | MKYTIKDIDM KLMENISKNT ALEMNLIALK ESSGKIFFYT SKEESKKREY LSLLFREKEI
NFVIGNKAEI EILIEDCYGG KSFSKDKFIE EELISLISLG IEKNTSDIHI EPLEEYANIR
FRIDGTLVLV KRIKKNLYEN LVNKIKLKAD MDISDKLRCQ DGKVSFKNYG YDCDLRISSI
PSTFGEKLVV RILYKKNELM NIDNLSLIEE QKNKINKLLK LKHGMVVING PTGSGKSTTL
YALLNSIDKE GINISTIEDP VEFTIEGITQ TNVNDKVGLT FANGLKHILR QDPDVILIGE
IRDEETAKIA IRASITGHKV YSTIHANSGN EVFNRLLDMG VEGYLVKEGV SSIITQRLVR
KICEKCKVKI ELKNELVEKL KEEELSLKAY YKGTGCEMCN WTGNNGRKAI CEIIFPREYK
STEDITWGEE LLKACFTLVK NGEISLEEYY LLKECEGLDV WF
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