Gene CPR_1803 details

Gene Information

• Locus tag: CPR_1803
• Symbol: efp
• ID: 4204713
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1997988
• End bp: 1998545
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 642566353
• Product: elongation factor P
• Protein accession: YP_699118
• Protein GI: 110802927
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00038] translation elongation factor P

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATCAG GAAGTGATTT AAGAAAAGGA ACTACTTTTG AACTGGATGG ACAAGTATAT 
ACAGTTATAG ACTTCTTACA CGTTAAACCA GGAAAAGGTG CTGCTTTCGT TAGAACTAAA 
TTAAGAAACG TTATAATGGG TGGTGTTACA GACAGAACTT TCAACCCAAC TGATAAATTA 
CAAGAAGCTA TAATCGAAAG AAAAGAAATG CAATACCTTT ACTCAGATGG AGAATTATAC 
TACTTCATGG ATCAAGAAAC TTTCGAGCAA ATTCCTTTAA ACCATGAAAA AGTTGAAGAT 
GCTATAAAAT TCTTAAAAGA AAACATGAAC GCTGTAATCA AATTCTACAA AGGAGAAGCT 
TTCTCAGTAG AAGCTCCAAA CTTTGTTGAA TTACTAATCA CTGAGTGTGA GCCAAGTGTT 
AAAGGAAACA CTGCTACTAC AGCTATGAAA ACTGCAGTTG TTGAAACTGG TGCAACAGTT 
ATGGTTCCTA TGTTCGTTGA AGAAGGAAAC ACTATAAGAA TAGATACTAG AACTGGCGAG 
TACATGGAAA GAGTTTAA 

 

Protein sequence

MISGSDLRKG TTFELDGQVY TVIDFLHVKP GKGAAFVRTK LRNVIMGGVT DRTFNPTDKL 
QEAIIERKEM QYLYSDGELY YFMDQETFEQ IPLNHEKVED AIKFLKENMN AVIKFYKGEA 
FSVEAPNFVE LLITECEPSV KGNTATTAMK TAVVETGATV MVPMFVEEGN TIRIDTRTGE 
YMERV