| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1783 |
|---|
| Symbol | recN |
|---|
| ID | 4204139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1982124 |
|---|
| End bp | 1983821 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 642566333 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_699098 |
|---|
| Protein GI | 110802669 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTAC AATTAACTAT AAATAACTTT GCTTTGATAG AAAAAGCATC TTTAGATTTT
AAAGAAGGAT TCACTATTTT ATCAGGAGAA ACTGGAGCTG GTAAGTCTAT TCTTATAGAT
GCGATAAATT ATGTTCAAGG AAGTAAGTTT AATAAGGACT TAATTAGAAC TGGAGAAGAA
AAGACTTTTG TAGAGGCTAT ATTTTCAATA GATGATAATG AGAGGCTTAA AGAAATTTTA
GATGATTTAG AAATAGAGTA TGATGATACT TTAATAATTT CTAGAGAAAC CTTTATAAAC
GGTAGAAGTA ATATAAAGGT TAATGGAAGA AGTATAATAG TAGCTACTTT AAAAAAAATA
AGTAGCACAC TTCTAGACAT ACATGGTCAA CATAATAATC AAAATTTATT AAATAAAGAA
AATCATATAA TGTATTTAGA TAATTTTGGA GATTCTAAGT TAAGTGAAGA TTTAAAAGAA
TATGGAGAAA AGTTCTTAGA GCTTAAGGAT ATAGAAAAAA AAATAAATGA ATTAAGCAAT
GAAGGAAAAG ATGAAAAACT TTTAAATTAT TTAGAATATC AATTAAATGA AATTGAAGAA
GCTAAGCTTA GAAATGGTGA GGAAGAGGAA TTAACAGAAA GATTTAATGT TTTATCTAAT
GCAGAAAAAA TAAAAAATTC ACTGGGAATA TCATATAATC TATTAAATGG TATTGAAAGC
AGTGTGGTGG ATTCTTTATC AGTAGTAAAT AGGGAGCTTT CAAATGTTGA AGAGCATTTA
GAAAAAATCA AAAATATAAA TTCTAAAATA ATGGAAATGT ACTATGAAAT ACAAGAAATG
GCTAGAGAAA TTAGAGATAT ATGTGATGAA AGTGTTTATG ATGGTAATGA ATTAGAAGAA
ATAAATAGCC GTATGTTTAA GATTGCTTCC TTAAAGAAGA AGTATGGAAA TAGTATAGCT
GAAATCTTAG AATATAAAAA TAATATTTTA TCTCAAATAA ATAATATTAA AAACTCAGAA
AAAATAATTC AAGATCTTTT AAATGAAAAA AGTAAAGTTG AGAATGTTTT AAGTGAAATA
GCTAATAGAA TTCATAATAA GAGAATAGAA CTTTCAAAAG TTTTAGAAGA AAATATCCAT
AAAGAACTAG CCTATGTTGG TTTAGGAAAA TGTAGATTTG AAGTTCTTAT TGAGGAAGAT
GAAACCTTTA ACTTTAAAGG TAAGGACAAA GTACAATTTC TTATATCAAC AAATCCTGGT
GAACCATTAA AGCCTATGGA AAGAATAGTT TCTGGAGGAG AACTTTCAAG AATAATGTTA
GCTTTAAAAG CTGTGTTTAT AGATAAGGAT AAGATTCCTA CAGTTATATT TGATGAAATA
GACACAGGTA TAAGTGGAAG AGTAGCTCAA TCCGTTGGAG AAAAGATGTA TGAAATATCA
ACAAAACATC AAGTTTTTTG TATCACACAT CTTCCTCAAA TAGCAAGTAT GTCGGACAAT
CATTATATGG TTAGAAAAAA AGTAATAGAT AATAAAACTT TTTCAAAGGT TGAACCTATA
ACTTATAATC AAAAAATTGA AGAGGTTGGA AAAATGCTAG GTGGCGTTGA AATGACAAGC
AATACATTAT TAAATGCTAA AGAGATGATA GAGCTAGCTG ATACAAAAAA AGAAACAATT
AAGACTTTTC ATACATAA
|
|---|
| Protein sequence | MLLQLTINNF ALIEKASLDF KEGFTILSGE TGAGKSILID AINYVQGSKF NKDLIRTGEE
KTFVEAIFSI DDNERLKEIL DDLEIEYDDT LIISRETFIN GRSNIKVNGR SIIVATLKKI
SSTLLDIHGQ HNNQNLLNKE NHIMYLDNFG DSKLSEDLKE YGEKFLELKD IEKKINELSN
EGKDEKLLNY LEYQLNEIEE AKLRNGEEEE LTERFNVLSN AEKIKNSLGI SYNLLNGIES
SVVDSLSVVN RELSNVEEHL EKIKNINSKI MEMYYEIQEM AREIRDICDE SVYDGNELEE
INSRMFKIAS LKKKYGNSIA EILEYKNNIL SQINNIKNSE KIIQDLLNEK SKVENVLSEI
ANRIHNKRIE LSKVLEENIH KELAYVGLGK CRFEVLIEED ETFNFKGKDK VQFLISTNPG
EPLKPMERIV SGGELSRIML ALKAVFIDKD KIPTVIFDEI DTGISGRVAQ SVGEKMYEIS
TKHQVFCITH LPQIASMSDN HYMVRKKVID NKTFSKVEPI TYNQKIEEVG KMLGGVEMTS
NTLLNAKEMI ELADTKKETI KTFHT
|
|---|
| |