| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1734 |
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| Symbol | spoIIGA |
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| ID | 4205630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1930490 |
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| End bp | 1931296 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 642566284 |
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| Product | sporulation factor SpoIIGA |
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| Protein accession | YP_699049 |
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| Protein GI | 110803408 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02854] sigma-E processing peptidase SpoIIGA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0154682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGTAT ATATTGACAT TGTCATATTA GAAAATTTTT TAATTAACTT TTTTCTACTT
TATTTAACTT TACAGATCTT AAAAGATACA ATAATTTACA AGAGAGTAAT ATTATCAGCT
TTTTTAGGAG CAATATATAC CTTGTTTGTT TTTATTCCAG GATTAAATAT ACTCACATCA
TTGCCTTTAA AACTACTTTT TTCTTTTGGA ATGATTACTA TAATATCAGA AAGAAGAGAG
TTAAAGACAA TAATAAAAAG ATATATAACT TTTTTAGTGA TAACTTTTGC CTTTAGTGGT
ACTTGCTTTA TGTTTGCTTT AGTTGAAAAT CAGTATAATA TTTCAGAATC CTTTATAATA
AATGATTATT CAACTAAATC TATAATATTC TCACTAATTA TAAGTTATAT ACTTGTTAGT
GGAGTTATGA ATTATTTTAA AAATAGAGCT ATTATAAATA ACTTTATATA TGATTTAGAT
GTATGTATTG ATTCAGAAGT TGTTAATATT AAAGCTTTTT TAGATACAGG AAATGGACTT
GTAGAGCCTG CAACTGCATT GCCTGTAATA ATAGCAGAAA GAGAAAAGTT TAGAGGGATA
AACATTAAGG AAAAAGATCA ATTTAGGATA CCGTATAAAG TAGTTGATGG AAATTCAGGA
TATATGAAAG GGATTAAGAT TGACAATATA AAGCTTTGTA ATGTTAATGG GGAAACAATG
ACAAGAGATG CAATCTTATG TTTTTGTGAT AATAAATTAA GTAAAGAGGG AGAATATGAA
GCTTTATTGT CTAGAGGAAT TATATAG
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| Protein sequence | MTVYIDIVIL ENFLINFFLL YLTLQILKDT IIYKRVILSA FLGAIYTLFV FIPGLNILTS
LPLKLLFSFG MITIISERRE LKTIIKRYIT FLVITFAFSG TCFMFALVEN QYNISESFII
NDYSTKSIIF SLIISYILVS GVMNYFKNRA IINNFIYDLD VCIDSEVVNI KAFLDTGNGL
VEPATALPVI IAEREKFRGI NIKEKDQFRI PYKVVDGNSG YMKGIKIDNI KLCNVNGETM
TRDAILCFCD NKLSKEGEYE ALLSRGII
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