Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1722 |
Symbol | |
ID | 4205123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1916624 |
End bp | 1918021 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566272 |
Product | permease |
Protein accession | YP_699037 |
Protein GI | 110803100 |
COG category | [R] General function prediction only |
COG ID | [COG2252] Permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.644208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA AAATTCATGC TTTAAGTGAA GAAGGAAATT TACGTGTTTT ACCTGAGAAT AAAAGTGAAT ATAAGAGAGA ATTCTTAGCT GGAACAACAA GTTTCTTAGC AATGGCTTAT ATAATAGCTG TAAATCCATC TATATTAAGC GCAGCAGGAA TGCCAGCAGG TGCTATAGTA ACGGCAACAT GTATATCAGC AGTTATTGGA TGTTTAATAA TGGGGTTTTA TGCAAAACTA CCTTTTGGAC TAGCTCCTGG AATGGGACTA AATGCATTCT TTACTTTTTC AGTAGTTATA GGAATGGGAA TTTCTTGGGA AGTAGCTCTT ACAGCTGTTT TTGTAGAAGG AATAATATTT ATACTTTTAT CATTATTTAA AGTAAGAGAG GCTGTTGTTG ATGCAATTCC AATAAATTTA AAATATGCAG TTACAGCAGG GATAGGTCTT TTCATAGCTT TCATAGGATT TAATGGAGCT GGAGTTGTTA TTGGAAATCC AGATACAATG GTTGCTATGG GACAAGTTGG TCCTAAAATG TTAATAGCAA TGGTTGGACT TTGTATAATA GTAATTTTAG AAAAGAAAAA AGTTAAAGGT TCAATGCTAG TTGGTATAGT AGTTTCAACT CTTTTAGCTT GGGGATATGC TTCAATAAAT ACTGAAGCCG CAGCTAGTAT GGGAATCTAT TTGCCAAATG GAATATTTAA ATTTGAATCA ATAGCTCCAA TAGCAGGTAA AGTTAATTTT TCATATTTAA CTTCACCACA GCATGTATTT AATTTTATAA CTATAGTTTT CACATTTTTA TTTGTTGATT TTTTTGATAC AGTAGGAACT TTAATAGGAG TAGCTTCAAG AGCTAATATG TTAGATAAGA AGGGAAGAGT TCCTAATGCA GGTAAAGCAT TAATGACAGA TGCTATAGCA ACTACGGCAG GCGCTTTACT TGGAACATCT ACTGTAACAG TTTATGTTGA AAGTGCTACT GGAGTTGAAG AAGGTGGTAG AACAGGATTA ACAGCTATAA CAATAGGAGC TTTATTTTTC GTAGCAATGT TCTTTTCACC AATATTTGTA GCAGTACCAG CATGTGCTAC TGCACCAGCT TTAATATATG TTGGATATTT AATGCTAACT AGTGTGTTAA AAATAGACTT TAGTGATATT ACAGATGCAG TACCAGCATT TTTAATAATA GCTTTAATGC CTCTAACTTA TAGCATAGGT GATGGATTAA CAATTGGTGT TTTAACATAT GTAATATTAA ATATATTACA CAATATCTTT GCTAAAAACA AAGAAGATAA AAAAGAATTA TCAATGGTAA TGATAGTTTT AGCAATTATA TTTGTAATAA AACTTTGTCT ACCATTAATT ACTCAAATGA TAGGTTAA
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Protein sequence | MENKIHALSE EGNLRVLPEN KSEYKREFLA GTTSFLAMAY IIAVNPSILS AAGMPAGAIV TATCISAVIG CLIMGFYAKL PFGLAPGMGL NAFFTFSVVI GMGISWEVAL TAVFVEGIIF ILLSLFKVRE AVVDAIPINL KYAVTAGIGL FIAFIGFNGA GVVIGNPDTM VAMGQVGPKM LIAMVGLCII VILEKKKVKG SMLVGIVVST LLAWGYASIN TEAAASMGIY LPNGIFKFES IAPIAGKVNF SYLTSPQHVF NFITIVFTFL FVDFFDTVGT LIGVASRANM LDKKGRVPNA GKALMTDAIA TTAGALLGTS TVTVYVESAT GVEEGGRTGL TAITIGALFF VAMFFSPIFV AVPACATAPA LIYVGYLMLT SVLKIDFSDI TDAVPAFLII ALMPLTYSIG DGLTIGVLTY VILNILHNIF AKNKEDKKEL SMVMIVLAII FVIKLCLPLI TQMIG
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