| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1715 |
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| Symbol | def |
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| ID | 4204622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1910520 |
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| End bp | 1910963 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642566265 |
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| Product | peptide deformylase |
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| Protein accession | YP_699030 |
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| Protein GI | 110802372 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCAATAA GAAACTTAAG ATTTAATGAC GACGAAATAT TAAGAAAAAA ATGTAGAGTA
GTTGATGACA TTAATGATAG AATAAAAGTC TTAGTAGAAG ATATGATAGA AACTATGTAT
GAAAATAATG GAGTTGGATT AGCATCTCCA CAAGTTGGAA TACTAAAGAG AATATTTGTT
GTTGATGCTA TGGATGGAGC GGGTTCTAGA GTATTCATAA ATCCAGAAAT CTTAGAAAAA
AGTGGAGAGC AAACTGATGA AGAAGGATGC TTAAGCTTAC CAGGTAGACA TAAACCAGTA
AAGAGGGCTA ATAAAATAAA GATAAAGGCT TTAGATGTTA ATGGAAATGA GTTTGTATTA
GATGCAGAAG GATTTTTAGC AAGGGCTATA CAACATGAAT ATGATCATTT AGAGGGAGTA
CTTTTTATAG ATCATGAGCT TTAA
|
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| Protein sequence | MAIRNLRFND DEILRKKCRV VDDINDRIKV LVEDMIETMY ENNGVGLASP QVGILKRIFV
VDAMDGAGSR VFINPEILEK SGEQTDEEGC LSLPGRHKPV KRANKIKIKA LDVNGNEFVL
DAEGFLARAI QHEYDHLEGV LFIDHEL
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