| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1706 |
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| Symbol | |
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| ID | 4204022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1901294 |
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| End bp | 1901923 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642566256 |
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| Product | thiamine pyrophosphokinase |
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| Protein accession | YP_699021 |
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| Protein GI | 110801517 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1564] Thiamine pyrophosphokinase |
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| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTC TTATAATAGC TGGAGGAGAA AAGCCTAGTA GTGAGTTATT AAAAAGTGAA
ATTAAAGAGT GTGACTTATT AATAGCTGCT GATAGGGGAG CTGAAGCCTA TTTAGAAAAT
GGATTTACTC CAGATTATGC CTTAGGAGAC TTTGATTCTA TAGGAGAAGA ATATAAATAT
GTATTAGATA AAATAAAAGT AGAAAAATTT AATCCTGAGA AGGATAATAC TGATACTGAA
ATTGCTTTTT TTAAAGCGGT TGAATTAGGA GCTACAGAAA TTGTTTTCTT AGGGGTTACA
GGAACAAGAT TAGATCATGT TATGGCTAAT TTAGGACTTT TAAGAGAAGC TTTAGAGAGA
AACATTAATG CATGTATTAT TGATAATAAT AATAAAATTT ACCTAAAGAA TAAAAGGACA
ACTCTAAAAA AAGAATTTGG TAATTATATA TCATTTCAAG CTTTTGGTTC TCCAGTAGAT
AATTTTTCTA TAAAAGGTTC TAAATATGAA CTTTATAATC ATAAACTTTT AATAGGAGAT
TCATTATGTG TGTCTAATGA GTTTATTGAT GAATATATTG ATATATCATT TGAAAAAGGT
GAAGTTTTAG TTATATATTC AAGAGATTAA
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| Protein sequence | MKVLIIAGGE KPSSELLKSE IKECDLLIAA DRGAEAYLEN GFTPDYALGD FDSIGEEYKY
VLDKIKVEKF NPEKDNTDTE IAFFKAVELG ATEIVFLGVT GTRLDHVMAN LGLLREALER
NINACIIDNN NKIYLKNKRT TLKKEFGNYI SFQAFGSPVD NFSIKGSKYE LYNHKLLIGD
SLCVSNEFID EYIDISFEKG EVLVIYSRD
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