| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1681 |
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| Symbol | trmD |
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| ID | 4205764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1877339 |
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| End bp | 1878049 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642566231 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_698996 |
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| Protein GI | 110802605 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.119374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATTA ATATTCTTAC ATTGTTCCCA GAGATGTTTG ATATATTTAA ACATAGCATA
ATAGGAAGAG CTAGGGAAAA TGGTTTTCTA CATATAGAGA CGGTAAATAT AAGAGATTAT
ACTTTAAATA AGCATAAGAA GGTAGATGAT TATCCTTATG GTGGCGGAGC AGGAATGGTT
ATGACTCCTC AGCCAATTGT AGATGCTATA AAGGCTGTTA AAGAAAAAAA TAAGGGTAAG
GTTATATTTT TAGGACCAAG AGGTAAAACT TTCAATCAAG AAATGGCTAA GGAACTTTCT
AAAGAGGAAG AGCTTATTTT TGTTTGTGGA CACTATGAAG GTATAGATCA AAGAATTTAT
AAATATTTTG ATTTAGAAAT TTCTCTTGGA GATTTTGTGT TAACAGGTGG AGAAATGGCA
TGTATTCCAG TTATTGATAG CATATCTAGA TTAGTGCCAG GCGTTTTAGG AAGTGAAGAG
AGTTTCCAAG ATGAAAGTTA TTATGATGGG ACCTTAGAGT ATCCACAATA CACAAGACCT
TTTGAATTTG AAGGAGAGAA AGTTCCAGAG GTTCTTATAT CAGGTCATCA CGAAAATATA
AGAAAGTGGA GAAGAAAAGA ATCACTTCTT ATAACTAAGG AAAGAAGACC AGATATGTTT
GAAAAAATTA AACTTTCAAA AGAAGATATA AAATTGTTAA AATCAAAATA A
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| Protein sequence | MKINILTLFP EMFDIFKHSI IGRARENGFL HIETVNIRDY TLNKHKKVDD YPYGGGAGMV
MTPQPIVDAI KAVKEKNKGK VIFLGPRGKT FNQEMAKELS KEEELIFVCG HYEGIDQRIY
KYFDLEISLG DFVLTGGEMA CIPVIDSISR LVPGVLGSEE SFQDESYYDG TLEYPQYTRP
FEFEGEKVPE VLISGHHENI RKWRRKESLL ITKERRPDMF EKIKLSKEDI KLLKSK
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