| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1679 |
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| Symbol | rbgA |
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| ID | 4206488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1875880 |
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| End bp | 1876725 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566229 |
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| Product | ribosomal biogenesis GTPase |
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| Protein accession | YP_698994 |
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| Protein GI | 110803463 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.607688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATAA ACTGGTTCCC TGGCCATATG GTCAAAACTA AAAGAGAAAT ACAGAACAAT
TTAAAGCTTG TAGATGCTGT TATAGAAATT AGAGATGCTA GAATACCTAA ATCTTCTAAA
AATCCAGATA TAGACACTCT ATGTGCTGGT AAACCTAGAG TAATACTTTT AAATAAGAGT
GACTTAACTG ATCCTAAGGT AACTAAAGCT TGGAAAGATA GCTTAACTAA TGATGAAACA
ATTGTTTTAG AAGTAAACGC TTTAAAAGGT GAAGGATTAA ATGCTATAAA ACCTGCTCTT
TTAAAACTTT TAAAAGAGAA ACATGATAGA TTAAAAGCTA AAGGTTTAGC TAAAATCACT
ACTAGAGCTA TGGTTGTTGG AATTCCTAAC GTTGGTAAAT CAACATTTAT AAATAAAATG
GCTAAAAACA ATATAGCTAA AACTGGAGAT AGACCAGGTG TTACTAAGAA TAAACAATGG
ATAAAAACTA AGTTAGGCAT AGAATTAATG GATACACCAG GAGTTTTATG GCCTAAATTT
GAGGATGAGA TTGTTGGATT AAATTTAGCG TTTACTGGAG CTATAAAAGA CGAAATAATG
GATACTGAAG AATTAGCTCT TAAACTAGTT GAAAGACTTC AAGAAACAAA TCCAGAAGAA
TTAATGACTA GATATAAACT TACAGAACTT CATGAAAATC CATTAGATAA TTTAGATGCT
ATAGCTAGAA AAAGAGGAGC TATAATGGCA GGAAATCAAA TAGATTACAA TAGAATTGCA
GGAATAATTT TAGATGAATT TAGAGGCGGA AAAATAGGAA AAATATCTTT AGAAAAACCA
GAATAG
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| Protein sequence | MAINWFPGHM VKTKREIQNN LKLVDAVIEI RDARIPKSSK NPDIDTLCAG KPRVILLNKS
DLTDPKVTKA WKDSLTNDET IVLEVNALKG EGLNAIKPAL LKLLKEKHDR LKAKGLAKIT
TRAMVVGIPN VGKSTFINKM AKNNIAKTGD RPGVTKNKQW IKTKLGIELM DTPGVLWPKF
EDEIVGLNLA FTGAIKDEIM DTEELALKLV ERLQETNPEE LMTRYKLTEL HENPLDNLDA
IARKRGAIMA GNQIDYNRIA GIILDEFRGG KIGKISLEKP E
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