| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1678 |
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| Symbol | rnhB |
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| ID | 4204376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1875046 |
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| End bp | 1875864 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642566228 |
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| Product | ribonuclease HII |
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| Protein accession | YP_698993 |
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| Protein GI | 110801760 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.652859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAATT TAATAAAAGA TATGAGAGAA AATTTAAATT CATACTCTTT TAAAGTAGTA
AGTGATTTAG TAAAAGAGTT AGATGTAAAT AGAGATAACA AAGCTCAAAT AAAAGAACTT
GCTGACTTAT TAAAAGAGGA TAAAAGAAAA AATGTATCAT CTTTAGGAAA TAGATTAGAG
AAAAATCTAA ATAATCTTAT TAAAGAAGAG GAAAGAGTTA AAAACATGTA TTTTTTTGAT
AAGAGTTTTG GTGATTATAA GTATGTAGCT GGAGTTGATG AAGTTGGAAG AGGACCTTTA
GCAGGTCCCA TAGTTTCAGC AGCAGTAATA TTAGATTCTA GTAATTTAGA TGATATAATT
CTTTACATAA ATGACTCAAA AAAATTATCA GAACATAAAA GAGAAGAGTT AAGTGAGATC
ATAAAAGAAA AAGCCTTAAG TTATTCTATT TCAATGTGTG ATAGCAAGGA AATAGATGAA
AAAGGCATAG GATACTGTAA TAATCATGTA TTCATAAAAG CTTGTGAAGG ACTTAATATA
AAGCCTGATT TAGTCCTTTC AGATGGATAT TTAATAAAAA ACTTTAATGG AGAAAATAAG
CATGTTATAA AAGGTGATAC AAAAAGTGCT TGTATAGCCT GTGCTTCAAT AATTGCAAAA
GTTTATAGAG ATAATATTAT GAAGGAATAT CATAAAAAAT ATCCACAATA TGATTTTGAA
AAAAATGTTG GTTATGGAAC CAAGACTCAT GTAGATGCTT TAAAAGAAGT AGGGCCTACA
GAAATTCATA GAATGAGTTT TTTAAAGAAT ATTCTATAG
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| Protein sequence | MDNLIKDMRE NLNSYSFKVV SDLVKELDVN RDNKAQIKEL ADLLKEDKRK NVSSLGNRLE
KNLNNLIKEE ERVKNMYFFD KSFGDYKYVA GVDEVGRGPL AGPIVSAAVI LDSSNLDDII
LYINDSKKLS EHKREELSEI IKEKALSYSI SMCDSKEIDE KGIGYCNNHV FIKACEGLNI
KPDLVLSDGY LIKNFNGENK HVIKGDTKSA CIACASIIAK VYRDNIMKEY HKKYPQYDFE
KNVGYGTKTH VDALKEVGPT EIHRMSFLKN IL
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