Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1673 |
Symbol | codY |
ID | 4204003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1868876 |
End bp | 1869652 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566223 |
Product | transcriptional repressor CodY |
Protein accession | YP_698988 |
Protein GI | 110801731 |
COG category | [K] Transcription |
COG ID | [COG4465] Pleiotropic transcriptional repressor |
TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000117412 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACAC TACTTAGTAA AACTAGAAGA TTAAATAAGA TTTTACAAAA ATCAGGTACT GAAGCTATAG CTTTTGGAGA TATATGCCAA TTATTAAGTG ATGTTATGTC ATGTAATGTA TATTTAGTTG GAAGAAAAGG TAGAATATTA GGTTATTCTT TTTCTGAAAA ATTTGAATGT GACATAATGA AAGAAAAAGT TGTTGTTGAT AGAAAATTCC CAGAAGACTA CAATAATAAA TTAATAAACA TTCAAGATAC AATTGCAAAC ATACCTAATA AAGGGATATG TGTTTTTGAA GGAGTAGGCG AATGTTTAAT CTCTAAAAAA ATATCAACTA TTGTTCCTAT AGTTGGTAAT GGAGATAGAT TAGGGACTTT ATTATTAGCT AGGTTTGGGG AAGAATTTAA TGATGATGAC CTAGTTTTAG CAGAATATAG TGCTACAATA GTTGGGATGG AGCTTCTAAG AGCTAGACAA GGTGAAATAG AAGAAGAAGC ACGTAAAAAA GCAGTGGTTC AATTAGCTAT TGGAACTTTA TCTTACTCAG AATTAGAGGC TGTCGAACAT ATTTTTAGTG AGTTAAATGG AGATGAAGGA TTATTAGTAG CTTCTAAGAT AGCTGATAAA GTTGGAATAA CTAGATCAGT TATAGTAAAT GCTCTTAGAA AATTTGAGAG TGCAGGAGTT ATTGAGTCAA GAAGTCTTGG AATGAAAGGT ACTCATATAA AAATATTAAA CGAAAAGTTA ATGGATGAAC TTAAAAAGAT AAAATAA
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Protein sequence | MSTLLSKTRR LNKILQKSGT EAIAFGDICQ LLSDVMSCNV YLVGRKGRIL GYSFSEKFEC DIMKEKVVVD RKFPEDYNNK LINIQDTIAN IPNKGICVFE GVGECLISKK ISTIVPIVGN GDRLGTLLLA RFGEEFNDDD LVLAEYSATI VGMELLRARQ GEIEEEARKK AVVQLAIGTL SYSELEAVEH IFSELNGDEG LLVASKIADK VGITRSVIVN ALRKFESAGV IESRSLGMKG THIKILNEKL MDELKKIK
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