| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1667 |
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| Symbol | cdsA |
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| ID | 4206122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1863788 |
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| End bp | 1864582 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566217 |
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| Product | phosphatidate cytidylyltransferase |
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| Protein accession | YP_698982 |
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| Protein GI | 110803794 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0575] CDP-diglyceride synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.114415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAATCTA ATAGCAGATA TCTAGGCGCA CTTATAATGG CTCCATTTAT TGCTTTTATA
TTCCTAGGTG GAATTTGGCT TAAGCTATTT ACTATTGCTC TTTCTTTTGC AGGATTATAT
GAATATTATA AAACTGTTAA AGTAGCAAAA TTAAAGCCTA TTTCCATGGG GGGATATATA
TTATTAATAT TATATTACTT AACTTCAAAT AATTTTGAAA TGTTATCATT TTTAATAATA
ATAGCTACAT TTATATTACT TTGTGTTCCT ATACTTAATA TTGAATATAC ATTTATAGAT
GTTGCAGTTA CTGTTTTAGG ATTTATATAT GTAGGAGTTT TCTTTAGCTT CATACATTTA
GTAAACATCA AAGAAGGTGG ACAATACCTA GTTTGGTTAA TATTCCTATC ATCATGGCTT
TGTGATACTG CTGCATACTA TTCAGGTAGA TTCTTTGGTA AACACAAATT ATGTCCAAAG
GTTAGTCCTA AGAAGACTAT AGAAGGTTCT ATAGGAGGAA TATTAGGAAG TACATTAGCT
TGTGGAATAT TTGGTATAAT AATATCTAAT AGTTTCTCTT TAATACCTGT ATATCATTAT
TTTATAATAG GTATATTATG TGGAGTATTC TGTCAATTTG GTGATTTAGT TGCTTCATCA
ATAAAGAGAT ACGCAGGAAT AAAAGATTAT AGTAATTTAA TACCAGGACA TGGTGGAATA
TTAGATAGAT TTGATAGTAT ATTATTTGCT GGAACAATAG TATTCTTCTA TTTAACACTT
GTCTTAAAAT TTTAA
|
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| Protein sequence | MKSNSRYLGA LIMAPFIAFI FLGGIWLKLF TIALSFAGLY EYYKTVKVAK LKPISMGGYI
LLILYYLTSN NFEMLSFLII IATFILLCVP ILNIEYTFID VAVTVLGFIY VGVFFSFIHL
VNIKEGGQYL VWLIFLSSWL CDTAAYYSGR FFGKHKLCPK VSPKKTIEGS IGGILGSTLA
CGIFGIIISN SFSLIPVYHY FIIGILCGVF CQFGDLVASS IKRYAGIKDY SNLIPGHGGI
LDRFDSILFA GTIVFFYLTL VLKF
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