| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1658 |
|---|
| Symbol | infB |
|---|
| ID | 4204165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1851284 |
|---|
| End bp | 1853323 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642566208 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_698973 |
|---|
| Protein GI | 110803523 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAA TAAGAGTTTA TGAATTGGCA AAAGAGTTAA GAGTTCCAAG TAAAGTTCTT
ATAAACGTAT TAATGGATGA GTTCGGCGTT GAGGTTAAAA ACCATATGAG CGTTATAGAA
GATGAAGATG CTGCGTTAAT AAAAGAACTT TTAGCAGGAA GTGAAGCAAA CAGTGAATTG
GTTGCTGAAT ATGAAGCTGA ATTAGCTGAA GAAGTTAATA ATGCTGCTAA GAAGAAAAAG
AAAAGAAAAA AAGGTAGCGA AGATGATAGC TTAGAACAAG ACGTTGAAGT TATCGAAATA
GGGAAAACTA TAACAGTTAA AGAATTAGCT GAGAAATTAA ACAAACCAGT TAATGATGTT
ATAAAAACTC TTATCTTCAC AGGAGTAATG GCTGCTATAA ACCAAGAAAT AGATTTTGAA
ACAGCTGAAA AAGTTGCTGA AAAATATGAG GTTGCAGTTT ATGAAAAAGA AGAAGAGAAT
ACTTTAGAAG AGTTCGAAGA AGAAACTGAT GTAGAAGAAG AAAACCTAGC TAAGAGACCA
CCTATTATAA CAGTTATGGG ACACGTTGAC CATGGTAAAA CTTCATTACT TGATGCTATA
AGAAAATCAA AGGTAACAAG TACAGAAGCT GGTGGAATAA CTCAACATAT AGGTGCTTAC
ACTGTTGAAG TAAACGGAGA AACTTTAACA TTCTTAGATA CACCAGGACA TGAAGCTTTC
ACAGCAATGA GAGCTAGAGG AGCTCAAATA ACAGACGTAG TTATCTTAGT TGTTGCAGCT
GATGACGGAA TAATGCCACA AACAGTAGAA GCTATAAATC ACTGTAAGGC AGCTAACGTT
CCAATGATAG TTGCTATAAA CAAAATGGAT AGAGAAGGTG CTAATCCAGA TAGAGTTAAA
CAAGAATTAA CTGAGCATGG ATTAGTTGTT GAAGACTGGG GTGGAGATAT CATAGCAGTA
CCAGTTTCAG CTAAAACTAG AGAAAACATA GATACTCTAT TAGAAATGGT TCTTTTAACT
TCAGAAATGC AAGAATTAAA AGCAGATGCT GGAAGAAAAG CAAAAGGAAC AGTCGTAGAG
GCTAAATTAG ATAAAGGTAG AGGGGCTGTA GCAACATTAT TAGTTCAAAA TGGTACTCTA
CATATGGGAG ATTCAATCAT AGTTGGTAGT ACTTACGGAA GAATAAGAGC TATGTTTGAT
GACTCAGGTA AGAAGATAAA ATCAGCTGGC CCATCAATTC CAGTTGAGGT TTTAGGTCTT
TCAGAAGTAC CAGCTGCTGG AGATAGATTC ACGGTTGTTA AAGATGAAAA GACAGCTAGA
AATATGGCTG AAGCTAGAAA AGAAAAAATA AGACAAGAAA GTTTCGCAAC TTCACATAGA
GTTTCATTAG AAGATTTATA TAGCCAAATT AAAGAAGGTT CAGTTAAAGA GCTTTCAGTT
ATAGTTAAAG CAGACGTTCA AGGTTCTGTT GAAGCTATAA AAGCATCATT AGAAAAATTA
TCAACTGATG ATGTAAAGGT AAGAGTTATA CACGGAGCTG TTGGTGCTAT ATCAGAAACA
GATATAACAT TAGCTGCTGC ATCTAACGCT ATAGTAATAG GATTTAATGT TAGACCAGAT
AACAATGCCG TAGCAGCTTC AGAGAGAGAT GGAGTTGAAG TTAAAACTTA CAGAGTAATA
TACGACGCTA TAGAAGATAT TAAGTCAGCT ATGATCGGTA TGTTAGATCC AGAATACAAA
GAAGTTGTAT TAGGAACTGC TGAAATAAGA GCAACTTACA AAATTTCTAA CGTTGGAACA
ATTGCTGGAG GATATGTATT AACTGGTAAA TTAGTTAGAA ATGCAGATGT AAGAGTTATA
AGAGAAGGTA TTGTAATATT TGAATCTAAG TTAGCATCAT TAAAGAGATT TAAAGATGAT
GTAAAAGAAG TAAATGCTGG ATATGAGTGT GGATTTAGTG TGGAAAAGTT CAATGACATT
AAAGAAGGCG ATATAATAGA AGCATATACT ATGGAAGCTG TTCAAAGAAA AGAACTTTAA
|
|---|
| Protein sequence | MSKIRVYELA KELRVPSKVL INVLMDEFGV EVKNHMSVIE DEDAALIKEL LAGSEANSEL
VAEYEAELAE EVNNAAKKKK KRKKGSEDDS LEQDVEVIEI GKTITVKELA EKLNKPVNDV
IKTLIFTGVM AAINQEIDFE TAEKVAEKYE VAVYEKEEEN TLEEFEEETD VEEENLAKRP
PIITVMGHVD HGKTSLLDAI RKSKVTSTEA GGITQHIGAY TVEVNGETLT FLDTPGHEAF
TAMRARGAQI TDVVILVVAA DDGIMPQTVE AINHCKAANV PMIVAINKMD REGANPDRVK
QELTEHGLVV EDWGGDIIAV PVSAKTRENI DTLLEMVLLT SEMQELKADA GRKAKGTVVE
AKLDKGRGAV ATLLVQNGTL HMGDSIIVGS TYGRIRAMFD DSGKKIKSAG PSIPVEVLGL
SEVPAAGDRF TVVKDEKTAR NMAEARKEKI RQESFATSHR VSLEDLYSQI KEGSVKELSV
IVKADVQGSV EAIKASLEKL STDDVKVRVI HGAVGAISET DITLAAASNA IVIGFNVRPD
NNAVAASERD GVEVKTYRVI YDAIEDIKSA MIGMLDPEYK EVVLGTAEIR ATYKISNVGT
IAGGYVLTGK LVRNADVRVI REGIVIFESK LASLKRFKDD VKEVNAGYEC GFSVEKFNDI
KEGDIIEAYT MEAVQRKEL
|
|---|
| |