| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1652 |
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| Symbol | pnpA |
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| ID | 4205310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1845555 |
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| End bp | 1847663 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642566202 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_698967 |
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| Protein GI | 110803188 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCATA CCCATGAAAC TATCATAGCA GGAAGACCGA TGAAAGTTGA GTTCGGGAAA
TTAGGAATGC TTTCAGATGC TGCTATATTA ATGAGTTATG GTGATACAGT AATATTAACA
AATGTAAATG CATCAGAAAA ACCAAGAGAG GGAATAGACT TTTTCCCACT AAGTGTTGAA
TACGAAGAGA GATTATATTC AGTTGGTAAA ATACCAGGTG GATTTATAAA AAGAGAAGGA
AAACCTTCAG AGAAAGCTAT ACTAAATGGT AGAGCTATAG ACAGACCTTT AAGACCTTTA
TTCCCAAAAG GATATAGAAA TGATGTTCAA GTAGTATGTA CAGTTGTTTC AGTAGAAAAT
GATAACCTTC CTGAAATACT AGCTATAAAT GCTGCCTCAA TGGCATTATG TTTATCAAGC
ATACCTTTTA CTACTCCAGT GGCTGCAGTT CAAGTAGGAT TAATAGGAGA AGAATTCATA
CTAAACCCTA CTTCAAAGGA AAGAGAAGAA AGTTCACTTC AATTAACTGT TTGCGCAACT
AAGGAAAGAG TTATGATGAT TGAAGCTGGT GGAGATGAAA TCCCAGAAGA TACAATGATT
AATGCTATCA AATTTGGTTT TGATAAGTGT CAAGATATAA TAAAATTCCA AGAAGAAGCT
GTAAGTATGT TCGGTAAAGA GAAAAAAGTG CCAGAACTAC ATAAAGTACC AGAAGAAATA
GAAGAAGCTG TAAGAGAATT TGCTTTTGAT ATGATTAGTG AGTCAATGCA CATTACTGAT
AGAGATGAAA GAAATGCTGC AATGGACGAA GTTAAAGCTA AAATAAATGA AGAGTTCGAA
GAAAAATATC CAGATAACAT GTCTGATATT GGAGAAGCAG TTTATGATAT GCAAAAAGAA
GTCGTAAGAC ATATGCTTTT AAAAGAAGGA AAAAGACCTG ATGGAAGAGC TTTTGATGAG
GTAAGAAACA TTGGTTGTGA AGTTGGATTA CTTCCAAGAA CTCATGGAAC AGGATTATTT
ACAAGAGGAC TTACTCAAGT AATGACTGTT GCAACTTTAG GAGCAATAAG TGAAATTCAA
ATATTAGATG GTATTGGTGA AGAAGAATCT AAGAGATATA TGCATCACTA TAACTTCCCG
GCATACAGTG TAGGAGAAGT TAGACCATTA AGAGGACCTG GTAGAAGAGA AATTGGTCAT
GGAGCTCTAG CTGAAAGAGC TTTAGAACCA CTTATACCTT CAGAAGCTGA GTTTCCATAC
ACAATAAGAT TAGTATCAGA AGTACTAAGC TCAAATGGAT CTACTTCACA GGCTTCAGTT
TGTGGTAGTA CATTAGCACT TTTAGATGCT GGGGTTCCAA TAAAGAGACC AGCAGCAGGT
ATAGCTATGG GATTAATAAC TTCAAAAGAT TTAACTGAGG AAGAAGTTTT AACTGATATC
CAAGGTTTAG AAGATTTCTT TGGAGATATG GACTTTAAGG TAGCTGGAAC AGAAGAGGGA
ATAACTTCAA TCCAAGTAGA TACTAAAATA AAAGGTCTAT CAGAGAAAGT TATACACGAT
GCTATATATG GAGCGAGAAA AGCAAGATTA ATGATCTTAG ATAAGATTAA AGAATGCATA
CCAGCTCCAA GAGAAGAAGT TTCAAAATAT GCACCTAAGA CATCAACTCT ACAAATAGAT
CCTGAGAAAA TCAGAGATGT AATTGGGGCT GGTGGAAAAG TTATAAACAA GATTATAGCT
GATACTGGTG TTAAAATAGA TATAAAAGAA GATGGGTTAG TTTATGTTTC ATCAGCTGAA
TCAGAAGGTG TTAAAGAAGC TGTTAAAATA ATAGAAGGTT TAACTAAAGA AGTTAAATCT
GGAGAAATTT ATTTAGGTAA AGTTACAAAA ATTGCTCAAT TTGGTGCCTT TGTTGAGGTA
TTACCTAATA AAGAAGGATT AGTTCATATT TCTAAGTTAG ATAATAAGAG AGTAGAAAAA
GTTGAGGATA TAGTATCTGT TGGAGATGAA ATATTAGTTA AGGTAACAGA AATAGATTCT
CAAGGTAGAA TAAATCTTTC AAGAAAAGAT GCAATAAAAG AAGCTGAAGA AGAAAATAAA
CAGCAATAG
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| Protein sequence | MNHTHETIIA GRPMKVEFGK LGMLSDAAIL MSYGDTVILT NVNASEKPRE GIDFFPLSVE
YEERLYSVGK IPGGFIKREG KPSEKAILNG RAIDRPLRPL FPKGYRNDVQ VVCTVVSVEN
DNLPEILAIN AASMALCLSS IPFTTPVAAV QVGLIGEEFI LNPTSKEREE SSLQLTVCAT
KERVMMIEAG GDEIPEDTMI NAIKFGFDKC QDIIKFQEEA VSMFGKEKKV PELHKVPEEI
EEAVREFAFD MISESMHITD RDERNAAMDE VKAKINEEFE EKYPDNMSDI GEAVYDMQKE
VVRHMLLKEG KRPDGRAFDE VRNIGCEVGL LPRTHGTGLF TRGLTQVMTV ATLGAISEIQ
ILDGIGEEES KRYMHHYNFP AYSVGEVRPL RGPGRREIGH GALAERALEP LIPSEAEFPY
TIRLVSEVLS SNGSTSQASV CGSTLALLDA GVPIKRPAAG IAMGLITSKD LTEEEVLTDI
QGLEDFFGDM DFKVAGTEEG ITSIQVDTKI KGLSEKVIHD AIYGARKARL MILDKIKECI
PAPREEVSKY APKTSTLQID PEKIRDVIGA GGKVINKIIA DTGVKIDIKE DGLVYVSSAE
SEGVKEAVKI IEGLTKEVKS GEIYLGKVTK IAQFGAFVEV LPNKEGLVHI SKLDNKRVEK
VEDIVSVGDE ILVKVTEIDS QGRINLSRKD AIKEAEEENK QQ
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