Gene CPR_1646 details

Gene Information

• Locus tag: CPR_1646
• Symbol: pgsA
• ID: 4204768
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1838690
• End bp: 1839280
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642566196
• Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
• Protein accession: YP_698961
• Protein GI: 110802479
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0558] Phosphatidylglycerophosphate synthase
• TIGRFAM ID: [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTTG CAAATAAATT AACTTTAATT AGAATAATTT TAGTGCCAAT ATTCTTAGTA 
TTTATAGCTT ACCAAGACTT ACCTTATGGG AGTGTAATAG CGACACTTAT ATTCATAATA 
GCATCTGTTA CAGATCAACT AGATGGATAT ATTGCAAGAT CAAGAAATCA AGTAACTAAC 
TTTGGTAAGT TTATGGATCC TTTGGCAGAT AAGCTATTAG TTACAGCGGC ACTTATATCT 
TTAGTTGAAT TACAATTAGT TCCTGCATGG GCAGCTATTG TAATAATAGC TAGGGAGTTT 
GCTGTTTCAG GTTTAAGAAC CATAGCTGCA TCAGAGGGGT TAGTTATAGC TGCTAGCTGG 
TGGGGAAAAA TTAAAACTGT AATACAAATA ATTGCCATAG TACTTTTATT ATTACAAGTA 
AATATAATTA ATTCACCAGG AATTAAGGAA TTAGTTTCAG GTAGCAGCTT TTTAAGAAAT 
TTCTTTATAT ATGTTCCAGA TATATTCTTA TATTTAGCTG TTGCAATAAC AATAATTTCT 
GGAGTAGATT ACTTTAGAAA AAATAAAAAT GTTATAAATA CTTATAAATA A 

 

Protein sequence

MNLANKLTLI RIILVPIFLV FIAYQDLPYG SVIATLIFII ASVTDQLDGY IARSRNQVTN 
FGKFMDPLAD KLLVTAALIS LVELQLVPAW AAIVIIAREF AVSGLRTIAA SEGLVIAASW 
WGKIKTVIQI IAIVLLLLQV NIINSPGIKE LVSGSSFLRN FFIYVPDIFL YLAVAITIIS 
GVDYFRKNKN VINTYK