| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1644 |
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| Symbol | |
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| ID | 4206326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1835613 |
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| End bp | 1837148 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642566194 |
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| Product | phosphodiesterase |
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| Protein accession | YP_698959 |
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| Protein GI | 110803608 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAGTAG GAATACTTAT AGGAATAATA ATATTAGGAG TGGTAGGGTT TATTCAATAC
ACTCTTATAG AAAAAGCTTC AAAAAATAGG GTGGAAAGCT TGGAAAAAGA AGCTAGCTTA
GCGCTAGAAG AAGCTAAAAG AGAAGCTGAA TCAACAAAGA AAGAAGCCAT ATTAGAAGCT
AAAGAAGAGG TGCACAAACT AAGATCGGAT CTTGATAAAG AAATTCGTGA TAGAAGAAAT
GAGATTCAAA GGTTTGAAAG AAGACTTATC CAAAGGGAAG AGTCATTAGA TAAAAAAGGT
GAAATGCTTG AAAAAAGAGA AGATAGCATA AACAAAAAAT CTATAGAGAT TCAAGAACTT
GAAGAACGTG TACAAAGTTT ATACGGTGAA CAAAGAGCTG AACTTGAGAG AATTTCAAAT
CTTTCAAGTG AAGATGCAAG AACATTATTA TTAGATGAAG TAAGAAGAGA AATAAAACAT
GAATCAGCTA TGCTGATCAA AGAACTTGAG ACTAAGGCCA AAGAAGAAGC TGACAAAAAA
TCAAGAGAAA TAATTACTAA TGCTATTCAA AGATGTGCAG CAGATCATGT TTCTGAAACT
ACAGTACATG TTGTTGCCTT ACCTAATGAT GAAATGAAAG GAAGAATCAT TGGTAGAGAA
GGTAGAAATA TAAGAACTTT AGAAACTTTA ACAGGAGTTG ATTTAATAAT TGATGATACT
CCAGAAGCTG TTATTCTTTC AAGCTTCGAT CCAATAAGAA GAGAAGTTGC TAGAATAGCT
TTAGAAAAAT TAATTGTAGA TGGAAGAATT CATCCAGCTA GAATTGAAGA AATGGTAGAA
AGAGCTATTA AAGATGTAGA AAATGACATT AAGGAAGAGG GAGAACAAGC AACTTTCGAA
ACTGGTGTTC ATGGATTACA TCCAGAAATA ATTAAGCTTC TAGGAAGACT AAAGTACAGA
ACAAGTTATG GTCAAAATGT TTTAAAACAT TCAATAGAGG TTTCATATTT AGCAGGATTA
ATGGCATCTG AATTAGGTTT AGATGTAAAT CTAGCTAGAA GAGCAGGTCT TTTACATGAT
ATAGGTAAAG GGGTTGACCA AGAATATGAG GGTCCTCATG CTGTTATAGG TGGAGAACTT
GCAAAGAAAT ATCATGAATC ACCAGCTGTG GTAAATGCTA TAGCAGCCCA TCATGGTGAT
ACAGAAATGC AAACTCTTGA AGCAGTACTT GTTCAAGCAG CCGATGCTAT ATCAGCAGCT
AGACCAGGTG CAAGAAGAGA AACTTTAGAA GCTTATATTA AGAGATTAGA AAAATTAGAA
GAAATAGCTA CTTCATATGA AGGTGTAGAA AAGTCATATG CCATTCAAGC TGGAAGAGAA
ATTAGAATTA TGGTTAAACC AGATCAAGTT GACGATGCAG GGGCAATTGA AATGGCAAGA
AATATTGTTA AGAAAATAGA AGAACAATTA GAGTATCCAG GTCAAATCAA GATAAATGTA
ATAAGAGAAA CCCGTGCAGT TGACTATGCT AAATAA
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| Protein sequence | MVVGILIGII ILGVVGFIQY TLIEKASKNR VESLEKEASL ALEEAKREAE STKKEAILEA
KEEVHKLRSD LDKEIRDRRN EIQRFERRLI QREESLDKKG EMLEKREDSI NKKSIEIQEL
EERVQSLYGE QRAELERISN LSSEDARTLL LDEVRREIKH ESAMLIKELE TKAKEEADKK
SREIITNAIQ RCAADHVSET TVHVVALPND EMKGRIIGRE GRNIRTLETL TGVDLIIDDT
PEAVILSSFD PIRREVARIA LEKLIVDGRI HPARIEEMVE RAIKDVENDI KEEGEQATFE
TGVHGLHPEI IKLLGRLKYR TSYGQNVLKH SIEVSYLAGL MASELGLDVN LARRAGLLHD
IGKGVDQEYE GPHAVIGGEL AKKYHESPAV VNAIAAHHGD TEMQTLEAVL VQAADAISAA
RPGARRETLE AYIKRLEKLE EIATSYEGVE KSYAIQAGRE IRIMVKPDQV DDAGAIEMAR
NIVKKIEEQL EYPGQIKINV IRETRAVDYA K
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