Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1638 |
Symbol | |
ID | 4206300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1830503 |
End bp | 1831117 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642566188 |
Product | DNA polymerase III, epsilon subunit, putative |
Protein accession | YP_698953 |
Protein GI | 110803621 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.400233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTAC TTTTTTTTGA TACAGAGACT ACAGGAGTCA AACCCGGAAG TATATGTCAG CTTAGTTATA TTCTTGTAAA TACTTCAACT AAACCCCAAA AAACAATAGG TAAAAATATA TTTTTTACAG TTGATGAAAT GGAACCAGAA GCTGAAAGAA TCCATGGTTT TTCCTTAGAG AAATTATATG AATTAAGTGA AGGGATGTAC TTTGAAGATC TTTATGCTGA TTTCATAAAT GACTTCTTAG AAGCAGATTT TATAATAGGT CATAACGTTC AGTTTGATAT TAAATTCTTA AAACATGAAT TACTAGGTCT TGGAGAGTTC TTTGAACCTA ACAACGTATT TTGTACTATG AAATATTATA AAGATATTTG TAAAATATTA AGACCTACTG GAGATTATAA AAATCCTAAA CTTGAGGAAG TAATCAAACA CTTAAATATA ACTGATTCTG AAATAAGTGA AACTGCTAAT AAGTATTTCC AAGGTAGTGG AAACTATCAC GATGCTAGAT TTGATACAGC AGCAACTTAT CTTACTGTTA TAAACGGTAT AAAAAAAGGA TTAATTCCAA GAAATTATTT TACAAAACTT TTAGAAGCAA AATAA
|
Protein sequence | MKLLFFDTET TGVKPGSICQ LSYILVNTST KPQKTIGKNI FFTVDEMEPE AERIHGFSLE KLYELSEGMY FEDLYADFIN DFLEADFIIG HNVQFDIKFL KHELLGLGEF FEPNNVFCTM KYYKDICKIL RPTGDYKNPK LEEVIKHLNI TDSEISETAN KYFQGSGNYH DARFDTAATY LTVINGIKKG LIPRNYFTKL LEAK
|
| |