Gene CPR_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1623 
Symbol 
ID4204124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1814533 
End bp1815534 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content26% 
IMG OID642566174 
Producthypothetical protein 
Protein accessionYP_698939 
Protein GI110801549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000284938 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA AATCTATACC CTTTGATAAG CTTAAGTTTT ATTATGGAAT TCCCCATTCC 
CATACATCCT TATCAACAGG AAAAAGTAGT CCTTATGAAT CCTTAGAACA TGCTCGCTCT
AATGGATTAG ATTTTTTAAT AATTACTGAT CATAATAAAT ATTTAAGCGA AACTATCAAA
GAAAAAAATA GAGAAATTTC AAAATGGGAG TATTTAAATA AATGTATAAA TAAATTTAAT
AAAAAACATT CTGATTTTTT AGCCTTATGT GGTTTTGAAG CTAAATCAAC AACCTTAGGT
CACTTAAATA TCCTATGTCC TAATACATTT TTTACTGGAA TAATTCCAGA CATTAAATAT
CTATTACTTT GGCTCATTAA TGATCATACA GCCTTACTTA GTATTAATCA TCCTAAAAAT
TCCATAGCTA AAAAAATTGA ATTTACGCCT ATTTTAGATA AACTTTTATG TTCTATAGAG
GTTGGAAATG GAATTCATCC TAGTACTTAT ACAAGATATG ACTCTCAATT TTTCTCCCTT
TTAGATAAGG GATTTAAAAT AGGAGCTATA AATTCCCAAG ACAACCACAA ATTAAATCAA
GGAGATAGTG AAAATTTAAC CTGCGTAATT TCACATAAAT TAAATAAAAA CTCCTTACTT
GATGCATTTA AAAATAGACA TATATTTTCA ACGGAATCAA AAACTTTAAA AATGCTATTT
TCTTTAAATT CAACCTTTAT GGGGGGAACA ATAACTGTAT ATTCCGCCTC AAAAATTAGT
CTCTATTTAC AAGTTGAAGA TAATATAAAC AAAATATCTA AAGTTCAATT TTTAACTAAC
CTTGGAAAAA TCATTAAAGA AATTAAAGAT ATAGATTTGC ATAATGTTAA ATATATTTTT
GAAAAAGAGG TTTCTTTAAA TGAAACTTGG TTTGTGGCTA AAGTTTATTT AAATAACAAT
AAAGAGGCCA TGTCTTCTCC AATCTTTGTT AATTATGAAT AA
 
Protein sequence
MDKKSIPFDK LKFYYGIPHS HTSLSTGKSS PYESLEHARS NGLDFLIITD HNKYLSETIK 
EKNREISKWE YLNKCINKFN KKHSDFLALC GFEAKSTTLG HLNILCPNTF FTGIIPDIKY
LLLWLINDHT ALLSINHPKN SIAKKIEFTP ILDKLLCSIE VGNGIHPSTY TRYDSQFFSL
LDKGFKIGAI NSQDNHKLNQ GDSENLTCVI SHKLNKNSLL DAFKNRHIFS TESKTLKMLF
SLNSTFMGGT ITVYSASKIS LYLQVEDNIN KISKVQFLTN LGKIIKEIKD IDLHNVKYIF
EKEVSLNETW FVAKVYLNNN KEAMSSPIFV NYE