Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1623 |
Symbol | |
ID | 4204124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1814533 |
End bp | 1815534 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642566174 |
Product | hypothetical protein |
Protein accession | YP_698939 |
Protein GI | 110801549 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000284938 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA AATCTATACC CTTTGATAAG CTTAAGTTTT ATTATGGAAT TCCCCATTCC CATACATCCT TATCAACAGG AAAAAGTAGT CCTTATGAAT CCTTAGAACA TGCTCGCTCT AATGGATTAG ATTTTTTAAT AATTACTGAT CATAATAAAT ATTTAAGCGA AACTATCAAA GAAAAAAATA GAGAAATTTC AAAATGGGAG TATTTAAATA AATGTATAAA TAAATTTAAT AAAAAACATT CTGATTTTTT AGCCTTATGT GGTTTTGAAG CTAAATCAAC AACCTTAGGT CACTTAAATA TCCTATGTCC TAATACATTT TTTACTGGAA TAATTCCAGA CATTAAATAT CTATTACTTT GGCTCATTAA TGATCATACA GCCTTACTTA GTATTAATCA TCCTAAAAAT TCCATAGCTA AAAAAATTGA ATTTACGCCT ATTTTAGATA AACTTTTATG TTCTATAGAG GTTGGAAATG GAATTCATCC TAGTACTTAT ACAAGATATG ACTCTCAATT TTTCTCCCTT TTAGATAAGG GATTTAAAAT AGGAGCTATA AATTCCCAAG ACAACCACAA ATTAAATCAA GGAGATAGTG AAAATTTAAC CTGCGTAATT TCACATAAAT TAAATAAAAA CTCCTTACTT GATGCATTTA AAAATAGACA TATATTTTCA ACGGAATCAA AAACTTTAAA AATGCTATTT TCTTTAAATT CAACCTTTAT GGGGGGAACA ATAACTGTAT ATTCCGCCTC AAAAATTAGT CTCTATTTAC AAGTTGAAGA TAATATAAAC AAAATATCTA AAGTTCAATT TTTAACTAAC CTTGGAAAAA TCATTAAAGA AATTAAAGAT ATAGATTTGC ATAATGTTAA ATATATTTTT GAAAAAGAGG TTTCTTTAAA TGAAACTTGG TTTGTGGCTA AAGTTTATTT AAATAACAAT AAAGAGGCCA TGTCTTCTCC AATCTTTGTT AATTATGAAT AA
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Protein sequence | MDKKSIPFDK LKFYYGIPHS HTSLSTGKSS PYESLEHARS NGLDFLIITD HNKYLSETIK EKNREISKWE YLNKCINKFN KKHSDFLALC GFEAKSTTLG HLNILCPNTF FTGIIPDIKY LLLWLINDHT ALLSINHPKN SIAKKIEFTP ILDKLLCSIE VGNGIHPSTY TRYDSQFFSL LDKGFKIGAI NSQDNHKLNQ GDSENLTCVI SHKLNKNSLL DAFKNRHIFS TESKTLKMLF SLNSTFMGGT ITVYSASKIS LYLQVEDNIN KISKVQFLTN LGKIIKEIKD IDLHNVKYIF EKEVSLNETW FVAKVYLNNN KEAMSSPIFV NYE
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