Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1609 |
Symbol | |
ID | 4206186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1799803 |
End bp | 1801578 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642566160 |
Product | V-type ATP synthase subunit A |
Protein accession | YP_698925 |
Protein GI | 110803741 |
COG category | [C] Energy production and conversion |
COG ID | [COG1155] Archaeal/vacuolar-type H+-ATPase subunit A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.061044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAACGG GGAAAATTAT CAAGGTTTCA GGTCCTTTAG TAGTTGCTGA AGGTATGGAT GAAGCTAATG TATATGACGT TGTAAAAGTT GGAGAAAAAG GTCTTATCGG AGAGATCATT GAAATGAGAG GAGATAAGGC TTCAATCCAG GTATATGAAG AAACATCAGG TATTGGACCT GGGGACCCAG TTATAACTAC TGGAGAACCA CTTTCAGTAG AATTAGGACC AGGACTTATA GAGTCAATGT TCGATGGAAT ACAAAGACCT CTAGACGCTT TCATGAAAGC AGCTAATTCT GCTTTCTTAA GTAAAGGGGT AGAAGTTAAA TCTTTAAATA GAGAGAAAAA ATGGCCTTTT GTGCCAACTG CTAAAGTTGG AGATAAGGTT TCAGCTGGAG ACGTAATAGG AACAGTTCAA GAGACTGCCG TTGTTCTTCA TAGAATAATG GTTCCTTTCG GCGTTGAAGG TACAATAAAA GAAATCAAAG CTGGAGATTT CAATGTAGAA GAAGTTATCG CTGTAGTAGA AACTGAAAAA GGTGATAAGA ATTTAACATT AATGCAAAAA TGGCCTGTAA GAAAAGGTAG ACCATATGCA AGAAAATTAA ATCCAGTTGA GCCAATGACT ACAGGACAAA GAGTTATAGA TACTTTCTTC CCAGTAGCTA AAGGTGGAGC TGCTGCCGTT CCAGGACCTT TCGGAGCTGG TAAAACAGTA GTTCAGCACC AAGTTGCTAA ATGGGGAGAT ACTGAGATAG TTGTTTATGT TGGATGTGGA GAACGTGGTA ACGAAATGAC AGACGTTCTT AACGAATTCC CAGAACTTAA AGACCCTAAA ACTGGGGAAA GCTTAATGAA GAGAACAGTT CTTATCGCTA ATACATCTAA CATGCCAGTT GCTGCCAGAG AAGCATCAAT ATATACTGGT ATAACAATAG CAGAGTATTT CAGAGATATG GGATACTCAG TATCAATCAT GGCTGACTCA ACTTCACGTT GGGCAGAGGC TTTAAGAGAA ATGTCAGGAA GACTTGAAGA AATGCCAGGA GACGAAGGTT ACCCAGCATA CTTAGGATCA AGACTTGCTG ATTACTATGA AAGAGCTGGT AAGGTTGTAG CTTTAGGTAA AGATGGAAGA GAAGGAGCTG TTACAGCTAT CGGAGCAGTA TCCCCTCCAG GAGGAGATAT ATCTGAGCCA GTTACACAAT CAACTTTAAG AATAGTTAAA GTTTTCTGGG GACTAGATGC TCAATTAGCA TATAAGAGAC ACTTCCCATC AATTAACTGG TTAACATCAT ACTCATTATA CTTAGAAAAA ATGGGTGAAT GGATGGATGC TCACGTAGCA GACGATTGGT CAGCATTAAG AACAGAAGCT ATGGCACTTC TTCAAGAAGA AGCAAACTTA GAAGAAATAG TAAGACTTGT TGGTATGGAT GCACTTTCAG AAGGTGATAG ATTAAAACTT GAAGTTGCTA AGTCAATAAG AGAAGACTAT TTACAACAAA ACGCATTCCA TGAGAATGAC ACATATACTT CATTAAATAA ACAGTATAAA ATGTTAAACT TAATCTTAAG TTTCAGACAT GAGGCTGAAA AAGCTTTAGA AGCTGGAGTT TATTTAGATA AAGTATTAAA ACTTCCTGTT AGAGATAGAA TTGCAAGAAG TAAATATATT TCAGAAGAAG AGATAAGTAA GATGGATGAC ATCTTAGTTG AATTAAAATC AGAGATGAAC AAGTTAATCA GCGAGGGAGG TGTTCTAAAT GCTTAA
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Protein sequence | MKTGKIIKVS GPLVVAEGMD EANVYDVVKV GEKGLIGEII EMRGDKASIQ VYEETSGIGP GDPVITTGEP LSVELGPGLI ESMFDGIQRP LDAFMKAANS AFLSKGVEVK SLNREKKWPF VPTAKVGDKV SAGDVIGTVQ ETAVVLHRIM VPFGVEGTIK EIKAGDFNVE EVIAVVETEK GDKNLTLMQK WPVRKGRPYA RKLNPVEPMT TGQRVIDTFF PVAKGGAAAV PGPFGAGKTV VQHQVAKWGD TEIVVYVGCG ERGNEMTDVL NEFPELKDPK TGESLMKRTV LIANTSNMPV AAREASIYTG ITIAEYFRDM GYSVSIMADS TSRWAEALRE MSGRLEEMPG DEGYPAYLGS RLADYYERAG KVVALGKDGR EGAVTAIGAV SPPGGDISEP VTQSTLRIVK VFWGLDAQLA YKRHFPSINW LTSYSLYLEK MGEWMDAHVA DDWSALRTEA MALLQEEANL EEIVRLVGMD ALSEGDRLKL EVAKSIREDY LQQNAFHEND TYTSLNKQYK MLNLILSFRH EAEKALEAGV YLDKVLKLPV RDRIARSKYI SEEEISKMDD ILVELKSEMN KLISEGGVLN A
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