Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1607 |
Symbol | |
ID | 4205653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1797781 |
End bp | 1798425 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566158 |
Product | V-type ATP synthase subunit D |
Protein accession | YP_698923 |
Protein GI | 110802541 |
COG category | [C] Energy production and conversion |
COG ID | [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D |
TIGRFAM ID | [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0230905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAAA GATTAAATGT CAATCCTACT AGAATGGAAC TCTCAAAGCT AAAGAAAAGA TTAGCAACAG CAACAAGAGG ACATAAATTA TTAAAAGATA AGCAAGATGA GTTAATGAGA CAATTCATAA ATCTTATCAA ATATAATAAT CAATTAAGAG ATGAAGTTGA AAAGGAACTA GGAAGTTCCT TAAAAGACTT CGTTATGGCT AGAGCTGTTA TGAGTTCAGA GTTCCTAGAG GAAGCTATAG CATACCCTAA AGAAGAAATT GAGGTTGAAG TGGGAAATAA AAACATAATG AGTGTAAATG TGCCTATAAT GAACTTCAAA AGAAAATTAG AAGGTGATGA AGGTAGTATT TATCCTTATG GCTTTATGAA TACTTCAGCT GAACTTGATG ATGCAATTTC TAAACTATAT GGAATTTTAC CAAAGTTATT AGAACTTGCA GAAGTCGAAA AATCTGGTCA GCTTATGGCA GATGAGATAG AAAAGACAAG AAGAAGAGTT AACGCTCTTG AATATATGAC AATTCCTCAA TTAAAAGAAA CTATCAGATA CATCAGAATG AAGCTTGATG AAAATGAGAG AAGTGCCTTA ACAAGACTTA TGAAAGTTAA GTCTATGATA GAGCAAAGAG GATAG
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Protein sequence | MAQRLNVNPT RMELSKLKKR LATATRGHKL LKDKQDELMR QFINLIKYNN QLRDEVEKEL GSSLKDFVMA RAVMSSEFLE EAIAYPKEEI EVEVGNKNIM SVNVPIMNFK RKLEGDEGSI YPYGFMNTSA ELDDAISKLY GILPKLLELA EVEKSGQLMA DEIEKTRRRV NALEYMTIPQ LKETIRYIRM KLDENERSAL TRLMKVKSMI EQRG
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