| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1601 |
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| Symbol | rbsA |
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| ID | 4205167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1792231 |
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| End bp | 1793736 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566152 |
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| Product | ribose transport ATP-binding protein rbsA |
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| Protein accession | YP_698917 |
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| Protein GI | 110802039 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0126293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTGAAA GAACACCAAT GCTAAAAATG GTAGGTGTAT CAAAATCCTT TCCAGGAGTC
AAAGCTTTAG ATAATGTTAG CTTAATGGCT TATGGTGGAG AAGTTACTGC TTTAATGGGA
GAAAATGGAG CAGGAAAATC AACTTTAATG AAAATACTAA GTGGAGTATA TAAAAAAGAT
GAAGGTAAAA TATTCATTGA AGGAAGGGAA GTAGAAGTAA AGGGAATTAA ATCAGCAGAA
GAAGCTGGTA TAACAATAAT TCACCAAGAA CTTAGTGTTT TAAATAACTT AACTGTTTCA
GAAAATATAT TTTTAGGTAA TGAAAAACAT AGTAAATTTA CAGGAAGAAT AAATAAAAAG
TTATTAGATG AAAGAAGTAA AATGTTCTTA GAACAAATTG GTTGTGATAT AGATCCAAAT
AGATTAGTTA GTACTCTTAA TGTAGGTGAA AAGCAAATGA TAGAAATAGC AAAAGCCTTA
ACTAAGAATG CTAGAATAAT TATTATGGAC GAGCCTACTA CAGCCTTAAC TGATGTAGAG
ACTGAAAACC TTTTTAAAGT AATAGAGAAT TTAAGAAAAA AGGGAATAGC AATAATATAC
ATATCACATA GAATGGAAGA AATATTTAAA ATATGTCATA GAGTAGAAGT ATTAAGAGAT
GGTAAATATA CAGGAAGTGC AGAAATAAAA GACATAGATA ATGATAAGCT TATAGCAATG
ATGGTTGGAA GAACCATAGA GGATCAATTT CCATACAGAG ATGTTAAAAA AGGAGATTTA
GCTTTAGAAG TTAAAAATCT TAGCTGTAAG GAAGGAGTTA AAGGAGCTTC ATTTACTCTT
AGAAAGGGAG AAATATTAGG AATTGCAGGT CTTATGGGAT CTGGCAGAAC AGAGCTTGCA
AAAACAATAT TTGGAGAATA TAAAAAAACA AGTGGTGAAA TTTCTTTAAA TGGAAGTCTT
ATTAATATAA ATTGCATAAG TGATGCCATA AATAATGGTA TATGTTATCT TTCAGAGGAT
AGAAAAAAAG AGGGCTGTAT TTTAGGAATG TCTGTTGGAG AAAATATGAC CTTATGTAAC
TTAAAGAAAT ATGAAAATAA GTTTAAATCT CTTGATAAAA AAGAAGAAGC AAAGGATATA
GAGTACTATA TTAAGAAGAT AAACATAAAA ACTCCAAATA AGGAACAATT TATTAAGAAT
TTAAGTGGAG GTAATCAACA GAAGGTTATA CTTGCTAAAT GGCTTATGCT ATCTCCAGAA
GTATTAATAA TTGACGAGCC AACTAGAGGA ATAGACGTAG GTGCAAAAAA AGAAATTTAT
GAACTTTTAA ATGAACTTAA AGCTAGTGGA AAAGCCATAA TAATGATTTC TTCAGACTTA
CCAGAGGTTT TAGGAATTAG TGATAGAATT ATGGTTATGA GTGAAGGAAG AATCTCTGGG
GAATTAAATA GAGATGAAGC AAATCAAGAA AGTATAATGA AATTAGCCGT TGGAATAAAC
AATTAG
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| Protein sequence | MGERTPMLKM VGVSKSFPGV KALDNVSLMA YGGEVTALMG ENGAGKSTLM KILSGVYKKD
EGKIFIEGRE VEVKGIKSAE EAGITIIHQE LSVLNNLTVS ENIFLGNEKH SKFTGRINKK
LLDERSKMFL EQIGCDIDPN RLVSTLNVGE KQMIEIAKAL TKNARIIIMD EPTTALTDVE
TENLFKVIEN LRKKGIAIIY ISHRMEEIFK ICHRVEVLRD GKYTGSAEIK DIDNDKLIAM
MVGRTIEDQF PYRDVKKGDL ALEVKNLSCK EGVKGASFTL RKGEILGIAG LMGSGRTELA
KTIFGEYKKT SGEISLNGSL ININCISDAI NNGICYLSED RKKEGCILGM SVGENMTLCN
LKKYENKFKS LDKKEEAKDI EYYIKKINIK TPNKEQFIKN LSGGNQQKVI LAKWLMLSPE
VLIIDEPTRG IDVGAKKEIY ELLNELKASG KAIIMISSDL PEVLGISDRI MVMSEGRISG
ELNRDEANQE SIMKLAVGIN N
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