| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1597 |
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| Symbol | |
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| ID | 4206549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1785782 |
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| End bp | 1789036 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566148 |
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| Product | Snf2/Rad54 family helicase |
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| Protein accession | YP_698913 |
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| Protein GI | 110801800 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.154649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGTTG AAGATTTATT GTTACAAAGG TTTAAAGAAG AAACTACAGG AAGAAATTAT
GCTAAGGGGC AAAGAATAAT AAATAACGAT CTTGTGGAGT CAGTAGAAAT AGAAGACGAA
GAAGACTTAG TAGCTGTTAA TGGAATAGTA ATTTCAGAAC AATTATTTAG TAAATATAGT
ACGAAATTAG AGATAGATAT TAGAAGTAGG GGGATTTTAT CAACATATTG TACATGTCCT
GATTATGAAA AACATGAGTT TAGTAAGGAA AATTATTGTT GTAAGCATTT AGTAGCAACT
TTTTATAAGG CTTTAGGGGA TTTAGCTAAG AAAAAAGAGT TTGAAGAGGA TAAAAACTTA
TTTTCTAAGA AGAAAGAAAA TAAAATTTTA GATTTAATTC TTCAAGAGGA AACAGATAAA
GAAGAGTTAA AAATAGAGGT TTATATAAAT AAAAATGAGT GGAGTAATAG CATATTAGCA
GAGTTTAAAA TAGGAACTAA GTCTATGAGT TCAAATAAAC TTTATATATT AAAGGATATT
GAACAATTTT TAGTAGCTTA CTATAATAGA ATACCTATTA AATATAGTAA GGCTTTTACT
TTTGATATAA GGGAACAAAA GTTAAGTACT AAGGATAGGG AGTTAATAGA GTTTATAGAA
AGCTTAAAAG AGATAGAAAA GCCAATAAAA AGCTTCTTAA GAAATAGAGA TACATTTATA
GATGGTAAAA GCATAAAGAT ACCTAATTAT TTAGTAAGAG ATTTTTTTCG TGTTATAAAA
AATCATAGAA TTTATTTAAA TGAAGGATTT TTTTATAGAG CAGTAGAAAG TGAAGTGATT
TTTGAAGATG TTCCAATAGA TTTTTCTCTA AAGGATTCAA AAAATAATTT TGAACTGAGC
TCCTTAAACG GAATGCCTAA GGTTTTAGGA GATAGAGCTG ATGTATTCTT ATATGGAACT
AATATATATA TTCCTAAAAA AGATTTTTGT TATAAAATAA AGAATTACTT AGATATATTT
TCTGAAGGAA AGGTTATAAA GATTGATAAA TGTGAAGAGG AAAGAGTATT TAGAAAATTA
ATACCTTCCT TAAAAGATTT AACTGAGAAT GTAGTTCTTT CTAAAAATAT AATGAATAAG
ACGGTTTTAG AGCCTGTAAA ATTTAATTTT TACTTTGATA AAGAGGGGAA AGAAGCAACT
TTAACCTTAA AAGTAAAATA TGGTTCTTAT GAATTTAATA TATTTGATGA TTGTAAGGAA
AAAATAATAT ATAGAGATAT AAAAAAAGAA AAAGAAGTAA TCGCATTAAT TGAGAGATTT
AGCCTTGAAG AGATAAATAA AAAGTTTTAT TTCTATTTAG GAGATGAATA TATATTTAGC
TTTTTTAAGT ATGATGTATG CAAATTACAA GAGTATGGAG AAGTGTATTA TTCAGAAAAC
TTTAAAGGTA TAAAAAGTTT AGGAAGTAAA GGAATAAAGG GAGACATTAA ACCAGGAAGA
TATAATTATT TTGAGTTTGA CTTTAAAATA GGAGATATAC CTAGTGAGGA AACAAGAGAA
ATACTTAGAG CTTTTAGGGA GAACTTAAAG TTTTTTAAAC TTAAAAGTGG AGAATTTCTT
GATTTAGAAG AACTAGAATT AAAGCAATTT TTAAAGTTAT TAGATTCAGT GGATAATGGA
GATTTAGAGA AAAATTGCCT AGAAATAAAT AATAGTAGGG CATTATATAT AGCTAATTAC
ATAGAAGAGA AGGGGATTAG ATATATTAAG GGGAAAAAGA AGTTAAATGA ATTGAAAAGT
AAATTTAAAA ATATAAATAA ACTGTCCTTT GAAGTTCCTA AGGATCTTAA GGCTGAGCTT
AGAGAATATC AGAAGTTTGG ATACAATTGG CTTAAAACTT TGGAGCATTT AGGCTTAGGT
GGAATTCTTG GAGATGAAAT GGGGCTTGGA AAAACCCTTC AAGCAATTAC CTTTATTCTT
TCTAATAAGG GAAAGAAAAC ACTAATAGTA GCACCAACTT CCTTAATATA TAACTGGAAA
GAAGAATTTA ATAAATTTGC ACCTAATTTA GTTGTGGAGG TATTAAATGA AGGCAAGGAT
AAGAGGGAAG AAGCTTTAAG AGATATAGAG AGTAAGGATG TAATTATAAC TACCTATAAC
TTATTAAAAA GAGATTTAGA GGAATATAAG AAGATAAACT TTGATTATTG CTTTATTGAT
GAAGCGCAAG CTATTAAGAA CCCAGATTCT CAAAATTCTG AAGCTGTTAA AGAGGTTAAT
TCAGAATATA AATTTGCTTT AACTGGTACC CCTATGGAAA ATTCTCTTAT GGAACTTTGG
TCAATTTTTG ATTTTGTAAT GCCAGGATAT CTTTATGATA GAAAAAGATT CACTGTTAGA
TATTATAAAA AATTAAATGA AAGTGGAGAA GTATTAAATG AAATACATAG TCTTATAAAA
CCTTTCATAT TAAGAAGAAA GAAAAAAGAT GTTATAAAAG AATTACCTGA TAAGATTGAA
AAGATGCACT TAGTTGATTT AGGAGAAGAG CAGAAAAAGG TATATTCAAT ATATGCTAAT
AATGCTTTAT CAATTATGGA AAAGAAACAG GATGCAGAGG AGTTTAATAA GAGTAAAATA
GAAATATTAT CTTATATAAC TAAACTTAGA CAATTAGCCT TAGACCCTTC TGTAACAATA
AATGATTATA TGGGGGAAAG TGCTAAAATA GAGGCTTTAG TTGAAATACT AAATCAAGGA
ATAGAAGAAG GGCATAAAAT CCTTGTGTTT TCACAGTTTA CTTCAGTGTT AAAAAACATA
AGTAGTAGAC TTAAGGAAGA AAAAATTTCT TTTAGTTACT TAGATGGAAG TGTTTCATCT
AAGAAAAGAA TAAATATGGT GAATGAATTT AATGAAGGTG AAAACTCAGT ATTTTTAATA
AGCTTAAAGG CTGGGGGAAC AGGACTTAAC TTAACTTCAG CAGATATTGT AATTCATTTT
GATCCTTGGT GGAATCCAGC AGTAGAAAAT CAAGCAACGG ATAGAGCACA TAGAATGGGA
CAAAAAAATG TAGTAGAGGT TATAAAATTA ATAGCTAAAG GAACTATTGA GGAAAAGGTA
GTAGCTCTTC AAGAGGAGAA GAAGGAACTG ATTTCTAAGA TTATTGAAGA GGGAGAATTA
GGAGCAGGAA GTACATTTAA TACTTTAAGT GAAGAAGAGT TAATGGATTT ATTCAAAGTA
GATTATTTAG GTTAA
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| Protein sequence | MLVEDLLLQR FKEETTGRNY AKGQRIINND LVESVEIEDE EDLVAVNGIV ISEQLFSKYS
TKLEIDIRSR GILSTYCTCP DYEKHEFSKE NYCCKHLVAT FYKALGDLAK KKEFEEDKNL
FSKKKENKIL DLILQEETDK EELKIEVYIN KNEWSNSILA EFKIGTKSMS SNKLYILKDI
EQFLVAYYNR IPIKYSKAFT FDIREQKLST KDRELIEFIE SLKEIEKPIK SFLRNRDTFI
DGKSIKIPNY LVRDFFRVIK NHRIYLNEGF FYRAVESEVI FEDVPIDFSL KDSKNNFELS
SLNGMPKVLG DRADVFLYGT NIYIPKKDFC YKIKNYLDIF SEGKVIKIDK CEEERVFRKL
IPSLKDLTEN VVLSKNIMNK TVLEPVKFNF YFDKEGKEAT LTLKVKYGSY EFNIFDDCKE
KIIYRDIKKE KEVIALIERF SLEEINKKFY FYLGDEYIFS FFKYDVCKLQ EYGEVYYSEN
FKGIKSLGSK GIKGDIKPGR YNYFEFDFKI GDIPSEETRE ILRAFRENLK FFKLKSGEFL
DLEELELKQF LKLLDSVDNG DLEKNCLEIN NSRALYIANY IEEKGIRYIK GKKKLNELKS
KFKNINKLSF EVPKDLKAEL REYQKFGYNW LKTLEHLGLG GILGDEMGLG KTLQAITFIL
SNKGKKTLIV APTSLIYNWK EEFNKFAPNL VVEVLNEGKD KREEALRDIE SKDVIITTYN
LLKRDLEEYK KINFDYCFID EAQAIKNPDS QNSEAVKEVN SEYKFALTGT PMENSLMELW
SIFDFVMPGY LYDRKRFTVR YYKKLNESGE VLNEIHSLIK PFILRRKKKD VIKELPDKIE
KMHLVDLGEE QKKVYSIYAN NALSIMEKKQ DAEEFNKSKI EILSYITKLR QLALDPSVTI
NDYMGESAKI EALVEILNQG IEEGHKILVF SQFTSVLKNI SSRLKEEKIS FSYLDGSVSS
KKRINMVNEF NEGENSVFLI SLKAGGTGLN LTSADIVIHF DPWWNPAVEN QATDRAHRMG
QKNVVEVIKL IAKGTIEEKV VALQEEKKEL ISKIIEEGEL GAGSTFNTLS EEELMDLFKV
DYLG
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