Gene CPR_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1584 
Symbol 
ID4204077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1773082 
End bp1773645 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content29% 
IMG OID642566135 
ProductISCpe2, transposase orfA 
Protein accessionYP_698900 
Protein GI110801485 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00754423 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTGG CAAGAACACC CGTAATTTCA ATCATTGGAT GGATTGCCAC GACATATACT 
AAAAGTATAA ACCGTCTAAC ACTTGCAAAT AAGTTATATT TTCGTTTAAA ATATTTGACA 
TATGTTAAAT TGAATAATAA TTTAATTAAA GAGGTGGTAA TAATGTCTCA AGTCAAGCAA 
GGCAGAGGTT ATGTGTATTG TATTCAATAT CATATAGTAT GGTGTGTTAA ATACAGAAGA 
AAAGTATTGT TTGGTGATGT GGATAAATCT CTTAAAGAAA TAATATTAAA AATAGCAAGT 
GATAATAATT TTGAAATTTC TGAAATGGAA ACTGATAAAG ACCATATACA CCTGTTAATA 
GAATGTTCTC CACAACATCA AATTCCAAAT ATAATTAAAG CGTTAAAGGG AGTATCTGCA 
AGGTTACTGT TCTTGAAACA TCCTGAAATT AAAAGATATC TATGTGGAGG AAACCTATGG 
AATCCAAGCT ATTTTGTAGC TACTGTATCA GAGAATACAG AAGAACAAAT TAGAAACTAT 
ATTCAAAATC AACAAGTAAA GTGA
 
Protein sequence
MPLARTPVIS IIGWIATTYT KSINRLTLAN KLYFRLKYLT YVKLNNNLIK EVVIMSQVKQ 
GRGYVYCIQY HIVWCVKYRR KVLFGDVDKS LKEIILKIAS DNNFEISEME TDKDHIHLLI 
ECSPQHQIPN IIKALKGVSA RLLFLKHPEI KRYLCGGNLW NPSYFVATVS ENTEEQIRNY 
IQNQQVK