Gene CPR_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1580 
Symbol 
ID4205116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1769493 
End bp1770146 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content25% 
IMG OID642566131 
Producthypothetical protein 
Protein accessionYP_698896 
Protein GI110803093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00310808 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGTT TTAATATAGA AAAACAATCA ATGTGGAAAT GCATAACTAA GAATAAATTA 
ATTTGTAATG AAAGTGATAC TTTAGCAATA ATACTACCAG GCCTTGGGTA CACCCTAGAT 
AAAGCACTTT TAGATTATTC TAAACAGCTT ATTTTAGATT TTAAATTTGA TTGTTTAGGA 
ATAGAATATG GATTTCAAGT TAGTAGAGAA TCTTTTAATA GACAGGATGA AAATGATATA 
AGAGAATTAT TACTTGAAAC TCTAGATATT ATTTTTAGTG CCTTAGAACT TGGAAGAGGA 
AAATATAAGA GAATTATTCT TATAGGGAAA AGTTTAGGTA CAGTATTACA GGGTAAAATA 
CATAAAGAAA TTAAGGGAAA TTATGATATT CATATTAAAA ATATTTATTT AACTCCTATA 
AATGAGACCT TTAAAGAGAA TTTAGATAAA GAAGGATTAA TAATAACTGG TACTAAGGAT 
ACTTTAATAT CTTCAGAGAA TTTGGAAAAA ATAAAATCTG AGGGATTAAG AGTATTAGAA 
ATAGAGGATG CTGGCCATTC ATTATGTATA AAAGGAAATG TATTAAAGAG CATTAAAGCT 
TTAGAAATAA TAATTGAAAA TATAAAAGAT TATCTTGAAA GAATGTCAAT ATAA
 
Protein sequence
MNSFNIEKQS MWKCITKNKL ICNESDTLAI ILPGLGYTLD KALLDYSKQL ILDFKFDCLG 
IEYGFQVSRE SFNRQDENDI RELLLETLDI IFSALELGRG KYKRIILIGK SLGTVLQGKI 
HKEIKGNYDI HIKNIYLTPI NETFKENLDK EGLIITGTKD TLISSENLEK IKSEGLRVLE 
IEDAGHSLCI KGNVLKSIKA LEIIIENIKD YLERMSI