| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1569 |
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| Symbol | |
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| ID | 4206447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1760554 |
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| End bp | 1761135 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566120 |
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| Product | thiamine monophosphate synthase family protein |
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| Protein accession | YP_698885 |
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| Protein GI | 110801776 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.269331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTTAA TAACCAATAG AAAGTTAGTA AATAGGGAAA AATATTTTAA TACCATAGAG
GAAGCAGGTA AATATGGTGT TAAAAATATA ATTTTAAGAG AAAAAGATTT AAGCACAGAG
AAATTGATAG AGGTTTATAT AAAAATAAAA GAGTTAGTTC CAGAGGAAAC AAATATAATA
ATAAATTCCA ATATTGAAGC AGCAAAGATT TTGAAAGAGA AGTTTATTCA TTTAAGCTTT
AAGGATTTTA AGAAGAATTT AGAAGAAGTT AAATCCTTAG AGGTTGGAGT ATCTGTTCAC
TCTATCTTAG AGGCCATTGA AGCTGATAGA TTAGGGGCAA GCTATATATT AGTATCTCCT
ATTTTTGAAA CGCAATGTAA GAAGGACGTA ACTCCTAAGG GAATTAATTT TATAAAAGAG
ATTAAGGAAA AGGTAAATTG TAAGGTCATA GCCTTAGGCG GAATAAATGA GCTTAACTTT
AAAGAAGTAT TAGGAGCTGG CGCTGATGAT TTTGCATGTA TGTCACTTTT ATTTATGAGT
AACAATATAA AGGAATGCTT AGATACTTTT AAATCTCTTT AA
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| Protein sequence | MFLITNRKLV NREKYFNTIE EAGKYGVKNI ILREKDLSTE KLIEVYIKIK ELVPEETNII
INSNIEAAKI LKEKFIHLSF KDFKKNLEEV KSLEVGVSVH SILEAIEADR LGASYILVSP
IFETQCKKDV TPKGINFIKE IKEKVNCKVI ALGGINELNF KEVLGAGADD FACMSLLFMS
NNIKECLDTF KSL
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