Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1561 |
Symbol | |
ID | 4204556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1753503 |
End bp | 1754273 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642566112 |
Product | hypothetical protein |
Protein accession | YP_698877 |
Protein GI | 110803275 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTTTA ATAGAATTAT CAATTTCTCA ACTGAACTTG GGACTCTAAT GCTTGAAAAT GGTGCTGAAA CATATAGAGT TGAAGAAACC ATGAGCAGAA TCTGTTTGGT TTATGGAATA GAAAAAGTTG ATGTCTTTGT AATTCCTACA AACATAATAA TAACAATAAA AATATATAAA AATGCAATTT CTAGAACTAG AAGGGTAACA AGTAGAACTA TTAATTTAGA TAAAATAGCT AAATTAAACA ACCTTTCAAG AGAGGTTGCC TTTAATAAAG TTTCTATTGA AGATGCTGAA AAAAAACTCA GTATTATAGC TGATGAAAAA GAATATCCTC TTAAAATAAA AATATTAGGA TATTTAATTT CAGCTTCAAC CTTTACTCTA CTTTTTGGAG GTAATTCAAA GGATTCTTTA GTCTCAGGTT TTATAGGAAT AGTTCTTTGT CTTCTTGCAT ACTTTTTTAA TATTTTAAAG ACAAACAATT TCTTTGTAAA TATAATATCT GGAGCTTTGG CATCATTACT AGCTTTTCTT GCTGTAAGAT TTAATATTGC TCCTAATCTA AATGAAATAA TAATAGGTTC TTTAATGCCC TTAGTACCTG GACTTGCTAT AACTAACTCA CTTCGTGATA TAATAGCTGG TGATTTAGTT TCTGGAAGTG CTAAATTTAT TGAAGCCTTT TTAATAGCTG TAGGGATTGC TATTGGAAGT GCTAGTATTT TATCTATATT AATAAATCAC TATGGGGGTA TGTCTATATG A
|
Protein sequence | MDFNRIINFS TELGTLMLEN GAETYRVEET MSRICLVYGI EKVDVFVIPT NIIITIKIYK NAISRTRRVT SRTINLDKIA KLNNLSREVA FNKVSIEDAE KKLSIIADEK EYPLKIKILG YLISASTFTL LFGGNSKDSL VSGFIGIVLC LLAYFFNILK TNNFFVNIIS GALASLLAFL AVRFNIAPNL NEIIIGSLMP LVPGLAITNS LRDIIAGDLV SGSAKFIEAF LIAVGIAIGS ASILSILINH YGGMSI
|
| |