Gene CPR_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1561 
Symbol 
ID4204556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1753503 
End bp1754273 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content29% 
IMG OID642566112 
Producthypothetical protein 
Protein accessionYP_698877 
Protein GI110803275 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA ATAGAATTAT CAATTTCTCA ACTGAACTTG GGACTCTAAT GCTTGAAAAT 
GGTGCTGAAA CATATAGAGT TGAAGAAACC ATGAGCAGAA TCTGTTTGGT TTATGGAATA
GAAAAAGTTG ATGTCTTTGT AATTCCTACA AACATAATAA TAACAATAAA AATATATAAA
AATGCAATTT CTAGAACTAG AAGGGTAACA AGTAGAACTA TTAATTTAGA TAAAATAGCT
AAATTAAACA ACCTTTCAAG AGAGGTTGCC TTTAATAAAG TTTCTATTGA AGATGCTGAA
AAAAAACTCA GTATTATAGC TGATGAAAAA GAATATCCTC TTAAAATAAA AATATTAGGA
TATTTAATTT CAGCTTCAAC CTTTACTCTA CTTTTTGGAG GTAATTCAAA GGATTCTTTA
GTCTCAGGTT TTATAGGAAT AGTTCTTTGT CTTCTTGCAT ACTTTTTTAA TATTTTAAAG
ACAAACAATT TCTTTGTAAA TATAATATCT GGAGCTTTGG CATCATTACT AGCTTTTCTT
GCTGTAAGAT TTAATATTGC TCCTAATCTA AATGAAATAA TAATAGGTTC TTTAATGCCC
TTAGTACCTG GACTTGCTAT AACTAACTCA CTTCGTGATA TAATAGCTGG TGATTTAGTT
TCTGGAAGTG CTAAATTTAT TGAAGCCTTT TTAATAGCTG TAGGGATTGC TATTGGAAGT
GCTAGTATTT TATCTATATT AATAAATCAC TATGGGGGTA TGTCTATATG A
 
Protein sequence
MDFNRIINFS TELGTLMLEN GAETYRVEET MSRICLVYGI EKVDVFVIPT NIIITIKIYK 
NAISRTRRVT SRTINLDKIA KLNNLSREVA FNKVSIEDAE KKLSIIADEK EYPLKIKILG
YLISASTFTL LFGGNSKDSL VSGFIGIVLC LLAYFFNILK TNNFFVNIIS GALASLLAFL
AVRFNIAPNL NEIIIGSLMP LVPGLAITNS LRDIIAGDLV SGSAKFIEAF LIAVGIAIGS
ASILSILINH YGGMSI