Gene CPR_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1536 
Symbol 
ID4205747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1722195 
End bp1723190 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content30% 
IMG OID642566088 
ProductK+-dependent Na+/Ca+ exchanger related-protein 
Protein accessionYP_698853 
Protein GI110802588 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.153216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACA TATTTCTAAT AATAGGGTTC CTTTTACTTA TTAAAGGAGC AGATCTCTTT 
GTTGATGGGG CTTCAGGAAT AGCTAAAAAG CTAGGAGTTC CAGCGGTTAT AATTGGACTT 
ACTATTGTAT CATTAGGAAC TAGTGCGCCA GAGCTTGCAG TAAGTATATC AGCTGCATTA 
AAAGGTAGCA ATGATATTAC CATGGGAAAT GTTTTAGGGT CAAATTTATT TAACCTTTTA 
GCAGCTTTAG GATGTACAGC CATTGTAGCT CCTTTAGTCA TAAAGAAGCA CATAATAAAA 
AATGATTTTA TAGTAAATTT ACTTGCAACT TTTGTTTTGT ATGTTTTTAC TTTTACTGGA 
CTAATAGGAA GTAAAAATTC TTTATCTAGA ATGGATGGAT TAGTATTAGT CTTAATGTGT 
ATAACATATA TAATATATTT AATATATACA GTTAAGAGAA GCCATAAAAA AGAAGATGAA 
GTAGCAGTAA CTGTAGAATT TGAAGATTTT GAAGAGAAAA ACATAAAGTC ACCTAATAGC 
ACAGGCAAAA ATATTCTCTT ATCGATAGTT GGAGTTATAG GAATAATATT AGGTGGAAAA 
ATAGTTGTTG ATTCGGCCTC TGCAATTGCC TTAGGTTTAG GACTAAGTGA GAAATTAGTT 
GGACTTACAA TTGTGGCAAT AGGTACTTCT CTTCCAGAAC TTGTTACTTC TTTAGTGGCG 
GCTAAAAAGG GTGAAAATGA CATAGCTCTC GGAAATATAT TAGGATCTAA TACATTTAAC 
ATATTATTAA TATTAGGTTT ATCATCTTTA ATAAGCCCTA TAACAATAGC TGCAAGCTTA 
TCAGTAGATT TAATATTCCT TATAGTTGTT ACTTTAATAA TAGGTGCTTT AATTTTCTTA 
AATAAGAAAA AAGAAAAAGT ACTTACTAGA TACGAAGGGT TATTTCTTTT AGTTCTTTAT 
GTCGGATATA CAGTATATAT AATAATGAGA AATTAA
 
Protein sequence
MNYIFLIIGF LLLIKGADLF VDGASGIAKK LGVPAVIIGL TIVSLGTSAP ELAVSISAAL 
KGSNDITMGN VLGSNLFNLL AALGCTAIVA PLVIKKHIIK NDFIVNLLAT FVLYVFTFTG 
LIGSKNSLSR MDGLVLVLMC ITYIIYLIYT VKRSHKKEDE VAVTVEFEDF EEKNIKSPNS 
TGKNILLSIV GVIGIILGGK IVVDSASAIA LGLGLSEKLV GLTIVAIGTS LPELVTSLVA 
AKKGENDIAL GNILGSNTFN ILLILGLSSL ISPITIAASL SVDLIFLIVV TLIIGALIFL 
NKKKEKVLTR YEGLFLLVLY VGYTVYIIMR N