Gene CPR_1523 details

Gene Information

• Locus tag: CPR_1523
• ID: 4205312
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 1710226
• End bp: 1710762
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 23%
• IMG OID: 642566076
• Product: signal peptidase I
• Protein accession: YP_698841
• Protein GI: 110803190
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0681] Signal peptidase I
• TIGRFAM ID: [TIGR02227] signal peptidase I, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000512014
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATGCT TTAATTACAT TTTAGATCTA CCTGATAGCT TTTTTAAGAT TATAATAACC 
ATATTAATAT CATTAATTTT AATTTTAGGT TTCCTCTTAA ACAATATATT CATAGCTGTT 
GTTGATGGCT CTTCAATGGA AGATACTATT CATCACGGTG ATGTATTAAT TATAAATAAA 
AAATCCTATT CCACCACTTC TCCTAAAAGG TATGATATAG TAAATATTTA TGCACATTAT 
AAATATGATA ATTTTCTAGT TAAAAGAATC ATAGGTCTTC CTGGTGATAC AATTGAAATA 
AATAATTCTG AAGTATATAT AAATGGTGAT AAAATTTATG AATCATATAT AAAAGAAGAA 
ATGAATATTC CTTATTATTT AAAATTAAAG ATACCTAAAG ATAAATTCTT TGTTATGGGT 
GATAATAGGA ATATAAGTTT AGATTCTAGA TATTTTGGAC TAGTACAAGG TACTGATATT 
CAAGGCAAGG CAATCTTTAA ATATTGCTAT AAGAATCATA AATTTAAATT CTTTTAA 

 

Protein sequence

MKCFNYILDL PDSFFKIIIT ILISLILILG FLLNNIFIAV VDGSSMEDTI HHGDVLIINK 
KSYSTTSPKR YDIVNIYAHY KYDNFLVKRI IGLPGDTIEI NNSEVYINGD KIYESYIKEE 
MNIPYYLKLK IPKDKFFVMG DNRNISLDSR YFGLVQGTDI QGKAIFKYCY KNHKFKFF