Gene CPR_1501 details

Gene Information

• Locus tag: CPR_1501
• Symbol: ilvE
• ID: 4203977
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 1682132
• End bp: 1683157
• Gene Length: 1026 bp
• Protein Length: 341 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 642566055
• Product: branched-chain amino acid aminotransferase
• Protein accession: YP_698820
• Protein GI: 110801753
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
• TIGRFAM ID: [TIGR01123] branched-chain amino acid aminotransferase, group II

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.211929
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAAA AGACAGCTAT TGATTGGAAT AATCTAGGCT TCTCTTATAT GAAAACAGAT 
TATCGTTACA TATCTCACTA TAAAGATGGT AAATGGGATG AAGGAAAATT AGTTACAGAC 
AACAAATTAA GCATAAGTGA AGCTTCAACT GCCCTTCACT ATGGCCAACA ATGTTTTGAA 
GGTTTAAAAG CTTATAGAAC AAAGGATGGA AAGATTCAAC TTTTTAGAGT AGATGAAAAT 
GCTAAGAGAA TGAATAAATC ATGTGATAAA CTTTTAATGC CTGAAATACC AGTTGAAAAA 
TTCATAGACG CTTGTATGCA AGTTGTCAAA GCTAATGAAA GATTTGTGCC CCCATACGGT 
ACTGGTGCAA CTCTTTATAT AAGACCTTTC ATGATAGGTG TTGGTGATAA TATAGGTGTT 
AAATCTGCTC CTGAATTTAT ATTTTCAGTA TTCTGCCTTC CAGTTGGTGC TTATTTTAAA 
GGTGGAATGA AGCCTGTAAA CTTTATGATT GCAGATTATG ATAGAGCTGC TCCTAAAGGA 
ACTGGTGCCG CTAAAGTTGG TGGAAATTAC GCAGCAAGCT TAAAGGCTCA TGAAATAGCA 
GCAAAAAAAG GATTTGCTGA TTGTATATAT TTAGACCCAG CAACTCATAC TAAAATTGAG 
GAAGTTGGAG CTGCAAACTT CTTTGGAATA ACAAAGAAAG GTGAATTTGT TACTCCATAT 
TCAGAATCAA TTTTACCAAG TATAACAAAA TACTCTTTAA TGCAAATAGC TAAAGATTAT 
TTAAAAATGC CTGTATCAGA AAGAGATGTT TTAATAGATA ACTTAGATGA ATTCGCTGAG 
GCTGGTGCTT GTGGTACAGC TGCTGTAATA ACTCCAATAG GAGGAATAGA ATATAAGAAT 
AAACTTCATG TTTTCCATAG CGAAACCGAA GTTGGTCCTA TTACTAAAAA ACTTTATGAT 
CTTTTATCTG GAATGCAATT TGGAGATGTA GAAGCGCCTG AAGGATGGAT ATTTGAAGTT 
AAATAA 

 

Protein sequence

MDKKTAIDWN NLGFSYMKTD YRYISHYKDG KWDEGKLVTD NKLSISEAST ALHYGQQCFE 
GLKAYRTKDG KIQLFRVDEN AKRMNKSCDK LLMPEIPVEK FIDACMQVVK ANERFVPPYG 
TGATLYIRPF MIGVGDNIGV KSAPEFIFSV FCLPVGAYFK GGMKPVNFMI ADYDRAAPKG 
TGAAKVGGNY AASLKAHEIA AKKGFADCIY LDPATHTKIE EVGAANFFGI TKKGEFVTPY 
SESILPSITK YSLMQIAKDY LKMPVSERDV LIDNLDEFAE AGACGTAAVI TPIGGIEYKN 
KLHVFHSETE VGPITKKLYD LLSGMQFGDV EAPEGWIFEV K