| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1493 |
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| Symbol | |
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| ID | 4204831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1670868 |
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| End bp | 1674128 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566047 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_698812 |
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| Protein GI | 110803159 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0890895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATATAA AAAAATTAGT TATAAGATAT GCTTTTCTCT CCTTAATACT AATATTAATT
CAAGGCAAAA ATGTTTTGGC TTTAGGAGAA TCAGAAGTAA GGTTCAGCAA TTTAACATTA
AAAGATGGAT TATCCCAGTC TACAGTAAAT AAAATAATTC AAGATAATAA AGGATATGTA
TGGTTTGGGA CATCAGATGG GTTAAATAAA TATAATGGAC ATGATTTTGT TATTTTTAGA
GAATTAGTAA ATGATAAAAA TAGTATTAAT TCAAATTTTA TATCAGCTTT AATAAAATAT
GACAATGATA ATATTCTTGT TGGTACTAGT AAAGGTGTAA GTAAGATAAA TGTAATAACA
AATGAAGTAA GTAGAATGTT TGAGGATGAA GATGGAAAAA GCAAGCTATC AAATAGTAAT
ATATGGGATA TGTTAAAGCA TAGTGATGGA ACCATTTGGA TAGCTACTAG AAAAGGGTTG
AATCTTTATG ATCCTAAAAC AGGAGAGGTA TATGAAATTT TTAAAGATAC AGAGCCTAAA
GGATTAAAAA GTAATGTAGT TACTTCTTTA TGTGAGGATA AATACGGAAA TGTATGGGTT
GGAACAAGTG AGGGGTTAAG TGTAATTAAT ACAAAAACAA AGGGTATTCA ATCTATAAAT
GATATGTTAG ATAAAGATAA CTCATCAATT TCTAATCTTT ATAGAGATAA GGATGATAAT
ATATGGGTAG TAACTGATAA TCACATCATG TCAGTATCAA GTAATTATAA AGATATTACT
TATTTTGATA AAGAATTAGA GTCTTTTAAA ATATCTCCAG ATAGTGTAAA TGCAATTTAT
GAAGATTCAT ATAATAATTT ATGGATATCA ACTCAAAATG GATTGTTAGA ATATAATAAA
CAAAATAAAA AAATGCATTT TTTTGAAAGT AAGTATTATG ATGATACTAG TTTAGTTAAT
GATAATGTAT TAACTTCATA TGAAGATAGA AGTGGGTTGC TTTGGTTTGG TACGTATAAT
GGAATAAGTT TATTAAATCC TAATCAGCCA TTTAAGCATT ATAGAAGAGA ACCAGATAAG
GAAAATACTA TTAGTGATAA TAGTATGAGT GGGATTTATA AAGATTCTGA TGGGATGTTA
TGGCTTGGAA CTAACTCAGC AGGATTGAAT AAGTTAAATA CTAAGACTGG AGAAGTTGTA
AATTTCTATA GTGATAATAG TGATGAAAAT ACCTTAAGTA GCAATGTAGT TTGGCAAATA
TGTGAAGCAG ATAAAGATAA TTTGTGGGTT GCAACTCAAG GCGGAGTTAA TAAGATAAAT
AAAAAAAGTG GAAATGTTGA AAGATTAAAG TATCCAGAAA ATATGAGAGA AAGAAATAAA
ATGGATGCTA GAAATGTTTT TGTGGACAAA GATGGATTAT TGTGGATAGG AGCAAGAGGT
GGGTTACAAT CTTATGATGA TAAAACAAGA ACTTTCACTG ATTATGCTAA TGTTTTTAAG
TCTGTAGGTA TAGTTGAGAA TGCTGTAACA AGCATTTCTC AAGATGAAGA AGGATTTTTA
TGGATTACTA TAGGGATCGA TGGTGGTGTA GTAAAATTTG ACAAGAGCAA GGGAATAGTA
AAAAGCTATT TAAATAATAG TTTTGATAGC AATAGTCTTA TAAATAATGG AGTACGGTGT
TTAGAAAAAG ATTCTAAAGG GAACATTTGG ATTGGAACTG AAGCTGGATT AAGTAAATTA
GATCCTAAAA CTGATAAATT TACTAATTAT ACTGTTGTAA ATGGATTAGC TAATAATTTT
ATATATGGAA TACTTATAGA TGAAGAGGAT AATCTTTGGA TAAGTACAAA TGATGGGTTA
TCTAGATTTG ATCAAAAAGC AAATAAATTT ATAAATTATA CAGCTATGGA TGGTTTGCAA
AGTAATGAAT TTAATGGCAG ATCTTATTTT AAGGGCAAAG ATGGAGAAAT GTTTTTTGGA
GGAATAAATG GAGTAACTGC ATTTTATCCA AAAGATGTTT TAAAATTATC AAATAGTAGA
AATAAGAGTA AAGTAGTAAT AGATAAAATT AAGGTTAATA ATAAAATTTA TCCATATTAT
GGAGGAACTC TTAATTTAAA GTATAATGAA AATAACATAT CTATTGATTT CTTTTTGCCA
GATTATTTAA ACACAACAAA AACTACTTAT GAGTATAAGT TAGAAGGTGT TGATAAGGAA
TGGACTTTTG CTAATAAAAG AAATAATGCA ACTTATGCTA CCTTAGATTC TGGAATATAT
AAAGTTTTAA TTAGAGCTAG AGATAATCAT GGAGATTTAA CACCAGTAAC TGCTTTAGAC
TTAAAGATTG ATCCACCACC ATGGCGTACA CCAACGGCTT ATTTAATATA TTTTTCAAGT
GCAGTAATAG TTATTTTCTT AATGTGGAGT TACGTAACTG CTTTGGAAAA AACTGTCAAA
AAAAGAGCTG AGCAACTTAA AAAAGAGGCT AAAGAAAAAG AAAAGCTTTA TAAAGAAGCG
GCAGAGCTTA AAGATGAGAT GATAAAAAGA CAAAAGTTTA AAAATGATTA TTTTGTAAAT
CTTTCACATG AACTTAGAAC TCCATTAAAT GTAATATTAG CTACAGTGCA GTTAATAAAG
TTAAAGAATA AGAAAGAATG TCTAGGAAAA TATCAAGTGG AAGATTATAC TAATACTCTT
AGAAATAATG CAGATCATTT ACTTAAGATA ATAAATGATA TAATAGATTC ATCTAAAATA
GAGTCAGGTG CATATAAATT AAATATAGAA AAGCACGATA TAGTTTCTTT AGTTGAGGAT
ACAGCTTTAA GCTTAAAGGC TTATATTGAA GAAAACAATT TAGATATTAT AATAGATCCT
GAAATAGAAG AATTAGATGT AGAATGTGAT AAAAATGAGA TTGAAAGATG CGTTATTAAT
CTTTTATCTA ATGCTATAAA ATATACTCAT GGACATGGTA CAATTGAAGT TTTCATAAGA
GAGTGTGAAA ATGAAACTGT AGAAATTGCT ATAAAGGATA CTGGAGTTGG AATATCCAAG
GAGCAACAAA AAATTATATT TGATAGATTT GTACAAGCTG ATAGCATAGC TAAAAAACAA
TATAGAAGCA GTGGTATAGG CTTAACATTG GTAAAAAGTA TAATAGAACT TCACCATGGT
AAAATAAAAG TAGAAAGTGA ACTTAATAAA GGAAGTACTT TTATAATTAC ATTACCTATA
AGACAAGAGA AAAGTAAATA A
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| Protein sequence | MNIKKLVIRY AFLSLILILI QGKNVLALGE SEVRFSNLTL KDGLSQSTVN KIIQDNKGYV
WFGTSDGLNK YNGHDFVIFR ELVNDKNSIN SNFISALIKY DNDNILVGTS KGVSKINVIT
NEVSRMFEDE DGKSKLSNSN IWDMLKHSDG TIWIATRKGL NLYDPKTGEV YEIFKDTEPK
GLKSNVVTSL CEDKYGNVWV GTSEGLSVIN TKTKGIQSIN DMLDKDNSSI SNLYRDKDDN
IWVVTDNHIM SVSSNYKDIT YFDKELESFK ISPDSVNAIY EDSYNNLWIS TQNGLLEYNK
QNKKMHFFES KYYDDTSLVN DNVLTSYEDR SGLLWFGTYN GISLLNPNQP FKHYRREPDK
ENTISDNSMS GIYKDSDGML WLGTNSAGLN KLNTKTGEVV NFYSDNSDEN TLSSNVVWQI
CEADKDNLWV ATQGGVNKIN KKSGNVERLK YPENMRERNK MDARNVFVDK DGLLWIGARG
GLQSYDDKTR TFTDYANVFK SVGIVENAVT SISQDEEGFL WITIGIDGGV VKFDKSKGIV
KSYLNNSFDS NSLINNGVRC LEKDSKGNIW IGTEAGLSKL DPKTDKFTNY TVVNGLANNF
IYGILIDEED NLWISTNDGL SRFDQKANKF INYTAMDGLQ SNEFNGRSYF KGKDGEMFFG
GINGVTAFYP KDVLKLSNSR NKSKVVIDKI KVNNKIYPYY GGTLNLKYNE NNISIDFFLP
DYLNTTKTTY EYKLEGVDKE WTFANKRNNA TYATLDSGIY KVLIRARDNH GDLTPVTALD
LKIDPPPWRT PTAYLIYFSS AVIVIFLMWS YVTALEKTVK KRAEQLKKEA KEKEKLYKEA
AELKDEMIKR QKFKNDYFVN LSHELRTPLN VILATVQLIK LKNKKECLGK YQVEDYTNTL
RNNADHLLKI INDIIDSSKI ESGAYKLNIE KHDIVSLVED TALSLKAYIE ENNLDIIIDP
EIEELDVECD KNEIERCVIN LLSNAIKYTH GHGTIEVFIR ECENETVEIA IKDTGVGISK
EQQKIIFDRF VQADSIAKKQ YRSSGIGLTL VKSIIELHHG KIKVESELNK GSTFIITLPI
RQEKSK
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