Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1491 |
Symbol | |
ID | 4206109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1669390 |
End bp | 1669857 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 22% |
IMG OID | 642566045 |
Product | membrane flanked domain-containing protein |
Protein accession | YP_698810 |
Protein GI | 110803820 |
COG category | [S] Function unknown |
COG ID | [COG3402] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.381725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATA AATTAAGTAA ATTATTTATT GTTAAATCTA TTATTCTTAG ATTTTTAATC TTTTCACTTT TATATTTAGG CTTAAGCTTA GGATTTTATA GGTTAAAAAG TTTTAGTAGC TTTAACCAAT TAAATGGAAT TATGGATAAT ACTTTATGGG TTTTACAATT ATTAATTACA GTTATATTTA TTATATCAGT ATTAATATGT CCAATAATTA AGTATTTTAC GTGGTCTTAT TTTATATTTA GCGATTTTAT TGAGATTAGA TATGGAGTGT TATTTAAAAG ATATATATGT ATAAAAAGGA ATAATATAAA ATACATAAAT GTATGCGAAA ATCCAATAGA TATGATTTTA AGAATAAAGA GCATAAATAT TTATACTGCC GGAGGGAAAG TTAGTATTCC AGCAATTAAT AAGGAGCAGG TAGAATTTTT CAATTATATA GTTCAGGAGA GAGTTTAG
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Protein sequence | MKYKLSKLFI VKSIILRFLI FSLLYLGLSL GFYRLKSFSS FNQLNGIMDN TLWVLQLLIT VIFIISVLIC PIIKYFTWSY FIFSDFIEIR YGVLFKRYIC IKRNNIKYIN VCENPIDMIL RIKSINIYTA GGKVSIPAIN KEQVEFFNYI VQERV
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