| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1483 |
|---|
| Symbol | |
|---|
| ID | 4205615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1658282 |
|---|
| End bp | 1659298 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642566037 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase domain-containing protein |
|---|
| Protein accession | YP_698802 |
|---|
| Protein GI | 110802793 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0321246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG CAGTAAGAGG AGGACATAAT TTTCAGGCAA AAGGTTCTAG TGCTTTAATA
GATGAAACTA TTGAAAATAG AAAGGTTTAT AAAGCTTTAA TAAAATATTT AAGCATAGCA
GGTCATAATG TTATAGATGT AACTCCAGGA GAGTGTGATG TTAATACTGA TTTATATTTA
GGAGTTCAAA AGGCTGAAGA TAATAATGTT GAATTATTTA TATCAATACA CTTTGATAAA
GCTTATGATA AATATGAAGG TGCTTTAGGT ACTGGAACTT GGATCTATGG CAGAGGAGGA
AAAGCAGAGA TATATGCTAA GAGAATAGTA GATAATCTTT CAAAGGGAAC TGGACTTAAG
AATAGAGGGG TTAAGGAAAA TTCTAAACTA TATGAATTAA GAAAGACATC AATGCCAGCA
GTTTTGGTAG AAGTTTGTTT TTGTGAAGCA ACTGAGGATG TTAGGATATA CAAAGAAAAA
GGCACGGATC TTATAGGAAA GTTAATTGCT GAGGCTATAA ATGGAGATGA AATAGTAGGA
GGAGATACAA GACCCGAAAA TCCAGAAGGT TCTTTAAAAG AGAAATTTTT AAAATCAACT
AATGCAAAAG CTATAGCTAA TTTAGACCCT AGAGACAATC CAAGTAGCAT ATATAAAGAT
TTAGGAGAGA TATATAAAGG TGAGAGAATA AGAGTTTTAC CAGAGGTATG TGACAAGAAG
GATTATTTGC CTATAATCTA TTGGAAAGAT ACACCTAATA CAGAATCTCA AAAGGTATGG
GTTAATGCAA ATCAGAATTA TTTAAAAATA GATACTAATG CCACTGTTAT AAATGTAGTT
ACAGAATTAG ATGCTAGGTA TACAAAATCT AAAACATCCA GTAAGATGGG TTATGTGAAA
AATGGTGAAA GGCTTTATAT TCATAAAATA GAAAATGGAT ATGCACTAGG AACTTATTTT
GCAAGTGATG GATATAAGAC AGCCTGGTTT ACAGCAAAAT ATATAAGTTT AGATTGA
|
|---|
| Protein sequence | MKIAVRGGHN FQAKGSSALI DETIENRKVY KALIKYLSIA GHNVIDVTPG ECDVNTDLYL
GVQKAEDNNV ELFISIHFDK AYDKYEGALG TGTWIYGRGG KAEIYAKRIV DNLSKGTGLK
NRGVKENSKL YELRKTSMPA VLVEVCFCEA TEDVRIYKEK GTDLIGKLIA EAINGDEIVG
GDTRPENPEG SLKEKFLKST NAKAIANLDP RDNPSSIYKD LGEIYKGERI RVLPEVCDKK
DYLPIIYWKD TPNTESQKVW VNANQNYLKI DTNATVINVV TELDARYTKS KTSSKMGYVK
NGERLYIHKI ENGYALGTYF ASDGYKTAWF TAKYISLD
|
|---|
| |