| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1463 |
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| Symbol | |
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| ID | 4205954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1642628 |
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| End bp | 1643950 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566017 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_698782 |
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| Protein GI | 110803975 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0174433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAAAA AATTAAATTT ACTACAGGAT AAAGAAAGTA CATTATTAAG AAAATATATG
ATACCTTCAG TTCTAGGAAT GTTAGGCTTA TCAGTATGTA TATTATTTGA TACCATGTTT
ATAGGACATA AAATCGGAGA TTTAGGTTTA GCTGCACTAA ATATAGCCTT GCCAATATAT
AATTTATATA GTGCAATAGG TCTTACTATT GGAGTGGGAG GAGCAACAGC CCTATCCGTA
GCTATGGGGC AAAAAAAATT CCATAGGGTA AATAGAATAT TTACTTCGGC AGTATTTGCA
ACTATCATAT TTTGTATAAT AATAAGTTTA TTAGAAGTTT TCTTTTTAGA TAAAATAGTT
TATATGCTTG GAGCTTCAGA AGCAACCTTT CCTTTAGCTA AAGAATACTT AAAGATTATC
TTAGCCTTTA ATCCTGCTTT TATTTTTGCA TCTGCATTTA TTGTTTTTGT TAGAAATGAT
AGAGAGCCTA AATTAGCTAT GTACGCAGTA ATAGGATCAA ATACAACTAA TATAGTACTA
GACTATGTAT TTATATATAT ATTTAATTTA GGAATGTTTG GAGCAGCCTT AGCAACATCT
ATAGGTCAAT TGGTAGCCTT AGGAGTTTTA TCAATACATT TTATAAAGAA AAATAACACC
ATGCATATAG AGCTTGGAGG AATAAATTTA GACAATATAG GAAAGGTACT TAAAAATGGA
GTTCCTAGTT TCTTAAATGA AATATCAGCA GGTTTTGTTA TATTTATTTT TAATATTGTA
ATATACAAAT TTGAAGGCGA CTTAGGAGTT TCAGCATATG GAATAATTAC AAACATAGTT
TTAATATTCA TGGCAGTCTT TAATGGGGTA TCCCAAGGGG TTCAACCTTT AATAAGTGTA
AACTTTGGAG CTAAAAAGGA GGAGCGTGTT AAAGAATTTT TAAGGTTAAC AAGAATAATA
GTACTAATTT TAGGTGTAGT CTTCTTAGGT ATGGGATTAT TATTACCAAA TCAAATGATA
GGACTATTTA CAAGTGATAG AGGAATATTA TTAAGTATAA CTAGACAGGG AATATATCTA
TACTTTATAG CATTCTTATT TAATGGAAGC AACATACTTA ACATAGCTTA TTTACAAGCA
GTTGAAAAAT CAAAGGAATC CTCTCTTTTA TCAACACTTA GAGGATTAGT ATTTGTTATT
ATATTTATAA TAGTATTACC AAGAATTATT GGGGTTTATG GAGTATGGCT AACAATTCCA
GTAACTGAAT TAAGTACACT TTTATTGTTT TCTATATTTG AAATAAAAAA GAAAAAGATA
TAA
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| Protein sequence | MSKKLNLLQD KESTLLRKYM IPSVLGMLGL SVCILFDTMF IGHKIGDLGL AALNIALPIY
NLYSAIGLTI GVGGATALSV AMGQKKFHRV NRIFTSAVFA TIIFCIIISL LEVFFLDKIV
YMLGASEATF PLAKEYLKII LAFNPAFIFA SAFIVFVRND REPKLAMYAV IGSNTTNIVL
DYVFIYIFNL GMFGAALATS IGQLVALGVL SIHFIKKNNT MHIELGGINL DNIGKVLKNG
VPSFLNEISA GFVIFIFNIV IYKFEGDLGV SAYGIITNIV LIFMAVFNGV SQGVQPLISV
NFGAKKEERV KEFLRLTRII VLILGVVFLG MGLLLPNQMI GLFTSDRGIL LSITRQGIYL
YFIAFLFNGS NILNIAYLQA VEKSKESSLL STLRGLVFVI IFIIVLPRII GVYGVWLTIP
VTELSTLLLF SIFEIKKKKI
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