| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1454 |
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| Symbol | |
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| ID | 4206120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1635674 |
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| End bp | 1636558 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 24% |
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| IMG OID | 642566008 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_698773 |
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| Protein GI | 110803792 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0215589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTTA GAAAATTAAA AATATTTTTT GAAACAGCTA AATGTTTAAA TATGACTAAA
GTAGCTAAGT CTATGTATAT AAGTCAGCCA TCTATAAGTC AAGCCATAGC TGAATTAGAA
AGTGATCTTG ATGTTAAACT TTTTGATAGA ATAGGTAAAA GGCTTTATCT TACTCATGAT
GGGGAAGTAT ACTTTGAATA TAGTAGAAGA ATATTAAATC TTTATGAAGA GGCAAATAGT
ATAATTAGAA GTAGCAAAGA GGGTCAAAAA GGGAAAATAA TTATAGGAGC AAGTACAACG
ATAGGTATAT ATATACTTCC AAAATTAATA AAAGAATTTA ATGAGTTACA TAAAAATATA
GAAATCTCCT TAATAATAGA AAATACACAG TTAATAGAAG AGCTTATTAT TGAGAACAAG
GTTGATATTG CTTTAGTAGA AGGATATGTA AAATCAAATG AATTAGAAGT TTTTGACATA
GGTAAAGATG AGTTAGTATT TATATCAAAT TCTAATAATC CTATATTTTT AAAGGATAAA
ATAACTTTAA AAGATTTAGA AAATGAAAAT TTTATTATGA GAGAATCTGG AAGTGGTACA
AGAGAAATTA TAGAAAACTA TCTTATAAAG CAAGGATGTA ACTACAATGT ATATATGGAA
CTTGGAAATA CAGAGGCTAT TGTAAAAGTT GTAGAAACAG GTCTTGGTAT AGCCTGTGTT
TCTTGTAAGG CTATAGAAAA AAGAATTAAT GATGGATTAA TTAAAGAAAT AAAAATAGAT
GATATTAAAG TAAATAGAGA TTTATATCTT ATATATCATA AGGATAAATT TATTTCTAGA
AATTTGAAAA TATTTATAGA TAAAATTAAA AATTCAGATA TATAA
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| Protein sequence | MNFRKLKIFF ETAKCLNMTK VAKSMYISQP SISQAIAELE SDLDVKLFDR IGKRLYLTHD
GEVYFEYSRR ILNLYEEANS IIRSSKEGQK GKIIIGASTT IGIYILPKLI KEFNELHKNI
EISLIIENTQ LIEELIIENK VDIALVEGYV KSNELEVFDI GKDELVFISN SNNPIFLKDK
ITLKDLENEN FIMRESGSGT REIIENYLIK QGCNYNVYME LGNTEAIVKV VETGLGIACV
SCKAIEKRIN DGLIKEIKID DIKVNRDLYL IYHKDKFISR NLKIFIDKIK NSDI
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