Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1444 |
Symbol | |
ID | 4206367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1623892 |
End bp | 1626315 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565998 |
Product | hypothetical protein |
Protein accession | YP_698763 |
Protein GI | 110803496 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.239906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAGT TTGATAAAAA AAAGAAGAAT AATATTACTA TAGTAAATAT ATATAATTTT ATAAGAAAAA CTGTTTATCC AAGTGGTGAA TTTGTTGAAG ATGATTTTCA GACAGTAGTT AGAGAGATTG AGCTAATAAA ACAATATGGG TTCCCTGCAA CCTATGCACT TAAACATGAT GCTTTAATGG ATGAAAGATT CGTAAACCTT ATAAAAGAAT CCATAGATGA ATATGACGAG GTTGGAGCTT GGTTTGAGAT AACTGAGGAA TTAGCAAAGA AGGCAGGAGT TAAATGGAAG GGAGAAACTC CTATTGATGA TCATGTTCAT AGGGGATATT CACTAGGATA CAGTCCAGAG GATAGATTTA AAATGGCTGA TGTTTATATG GCTGATTTTA AGAGTATATT TGGATACTAT CCTAAGACAG TTGGCTCTTG GGTTATAGAT ATAAGAACTC TAACTTATTT AAAGGAGAAG TATGGAGTAA TAGGAGGGGC TATTTGTAGA GATCAAATTG GAACTGATGG ATTTACTCTT TGGGGAGGGT ATTTTAATCA AGCCTATTAT CCAAGCAAGT TAAATGAATA TATTCCAGCT CAAAGGGAAG AAATGCAATT AGATTTACCT TTATTTAGAC TTTTAGGACC AGATCCAATT TATAATTTTG AGGAGGGATT ACGAGAAGAA TTAAAAGGAG TTCATACTTT AGAGCCAGCA TGGATAATTG GACAAAATAA AGAATGGGTT CATTGGTTTT TTGAGTGTTT AAATGAAGAG GAGACCTTAG GATTTTCTTA CGCTCAGGTA GGACAGGAAA ATACATTTTT ATGGAATACC ATGTATAAGG GATATGAAGT TCAAATAGAA CATATATTCA ATTTGGAAAA GGAGAAGAAG CTTAGAGTTG AAACTTTAGC TGAAAGTGCA CTTTGGTATA AGAAGAAATA TAGATTAACT CCACCTACTA CCTTTGGTGC TAAAAAAGAT TGGAACACTT ATAATATGAA AACTTTATGG TATAACAGTA GGTTTTATAG AAGCAGTTTT TTATTTGAAA ATAATGTTTT AAGTATAAGA GATATTCATT TATTTAATGA AAATTATGAA TCAAGATATT ATGATAACTA TTTAGATGAC AATGAAAGTG TATTTGATGC ATTGCCTTTA ATGAGACCTC ATTACTGGAA AAATGAAATA GATGAAAGAC CAAAAATAAG CTTTGTTAAA TTAAAAAGAA TTGATGTATA TGAAAAAATT AAAGGAGGTG CCATAGACTT TAAAGTAGTT AATGAGGATA AATGCGAAAT AACATGGGAT TTAAATCATG AGGAAAGCAT AAAAATACTT TGCTATGAAG ATAAGATAAG TATTAAATTT AATGTGAAAG GTTCTAAAGA ATGTATGCTT TGTATAAATA CCTTACCTGT TCTTCAGGAA TTAAATTTAA ATACTATTTT ATGTAAGCAC AATGATTTTA AATATAAAAT TTCTTTAATT AAGGGAGAAT TCTCAGTAGA TGAAGAATCT AAGATATTAA TAATTCCAGA GGAGGGGGAA ATACTTTTAG ATTTAAACAC TATTTGTGAA AAAACTAAGG AAAAAGAGTT CTTTACTGAT GAATATTTAA AAAATAGAGA AGGGATAGAT GGATATGTAC CGGAATATAA AAGGTATAAG AAAGGTAGTA AGGTTAAACT TAGAGCCTTT AGACCAATTG TAAATATAGA TACTTTACTT ATTAATAAAC CATTTTCTCA AGAAATTCTT TTAGGAAAAA GAGATAAAAA AGGAGAAATT AGATATACTT TAGATGGAAG TGAGCCAAAT GAGAAATCTT TGTTATATAA AGAGCCCATA GTTGTTAATG ATAGAGCTTT TATAAAAGCT AAGGTTTTTA AAGAAGGATA CAAGCCTAGT AATACTGTGG AAAGTAGAAT ATATGTAACT TTGCCAATAG CTAATATTAA AGGGTTAACT AAGCCTACAG ACCACTATAT GTACAATAAA AGAGGAGTTT ATGATTTAAT AGATGGTGAA AAGGGAAGTT TGCATTATAC TGATGGAAAA TGGCTTGGAT ATACAGAAGA TATGGAAGTA ATAGTGGATT TAGGAGAAGT AAAAGAAATA AAAGAAATAA TGGTTGGATT TTTACAAGAC ACAAGAGCTT GGATTTACTA TCCTAAGTTT GTAGAGTTTT ATTCTTCTGT AGATGGAGAA GAGTTTACCT TATTAACAAG GGAAGAAAAG GATAAGAATG AAAAAAGAGA AGAAGTAGGA AAAAAGGACA TTACATCACA AAGAGAAATT AAGACTAGGT ATATTAAAAT ATTTGCAAAG AATGAAGATG TATGTCCAGC TTGGAGTATA ATGCCTGGAG ATGGTCCTAC CTTTATGTTT GTTGATCAAG TTACAGTAAT ATAA
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Protein sequence | MIKFDKKKKN NITIVNIYNF IRKTVYPSGE FVEDDFQTVV REIELIKQYG FPATYALKHD ALMDERFVNL IKESIDEYDE VGAWFEITEE LAKKAGVKWK GETPIDDHVH RGYSLGYSPE DRFKMADVYM ADFKSIFGYY PKTVGSWVID IRTLTYLKEK YGVIGGAICR DQIGTDGFTL WGGYFNQAYY PSKLNEYIPA QREEMQLDLP LFRLLGPDPI YNFEEGLREE LKGVHTLEPA WIIGQNKEWV HWFFECLNEE ETLGFSYAQV GQENTFLWNT MYKGYEVQIE HIFNLEKEKK LRVETLAESA LWYKKKYRLT PPTTFGAKKD WNTYNMKTLW YNSRFYRSSF LFENNVLSIR DIHLFNENYE SRYYDNYLDD NESVFDALPL MRPHYWKNEI DERPKISFVK LKRIDVYEKI KGGAIDFKVV NEDKCEITWD LNHEESIKIL CYEDKISIKF NVKGSKECML CINTLPVLQE LNLNTILCKH NDFKYKISLI KGEFSVDEES KILIIPEEGE ILLDLNTICE KTKEKEFFTD EYLKNREGID GYVPEYKRYK KGSKVKLRAF RPIVNIDTLL INKPFSQEIL LGKRDKKGEI RYTLDGSEPN EKSLLYKEPI VVNDRAFIKA KVFKEGYKPS NTVESRIYVT LPIANIKGLT KPTDHYMYNK RGVYDLIDGE KGSLHYTDGK WLGYTEDMEV IVDLGEVKEI KEIMVGFLQD TRAWIYYPKF VEFYSSVDGE EFTLLTREEK DKNEKREEVG KKDITSQREI KTRYIKIFAK NEDVCPAWSI MPGDGPTFMF VDQVTVI
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