Gene CPR_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1444 
Symbol 
ID4206367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1623892 
End bp1626315 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content30% 
IMG OID642565998 
Producthypothetical protein 
Protein accessionYP_698763 
Protein GI110803496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.239906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGT TTGATAAAAA AAAGAAGAAT AATATTACTA TAGTAAATAT ATATAATTTT 
ATAAGAAAAA CTGTTTATCC AAGTGGTGAA TTTGTTGAAG ATGATTTTCA GACAGTAGTT
AGAGAGATTG AGCTAATAAA ACAATATGGG TTCCCTGCAA CCTATGCACT TAAACATGAT
GCTTTAATGG ATGAAAGATT CGTAAACCTT ATAAAAGAAT CCATAGATGA ATATGACGAG
GTTGGAGCTT GGTTTGAGAT AACTGAGGAA TTAGCAAAGA AGGCAGGAGT TAAATGGAAG
GGAGAAACTC CTATTGATGA TCATGTTCAT AGGGGATATT CACTAGGATA CAGTCCAGAG
GATAGATTTA AAATGGCTGA TGTTTATATG GCTGATTTTA AGAGTATATT TGGATACTAT
CCTAAGACAG TTGGCTCTTG GGTTATAGAT ATAAGAACTC TAACTTATTT AAAGGAGAAG
TATGGAGTAA TAGGAGGGGC TATTTGTAGA GATCAAATTG GAACTGATGG ATTTACTCTT
TGGGGAGGGT ATTTTAATCA AGCCTATTAT CCAAGCAAGT TAAATGAATA TATTCCAGCT
CAAAGGGAAG AAATGCAATT AGATTTACCT TTATTTAGAC TTTTAGGACC AGATCCAATT
TATAATTTTG AGGAGGGATT ACGAGAAGAA TTAAAAGGAG TTCATACTTT AGAGCCAGCA
TGGATAATTG GACAAAATAA AGAATGGGTT CATTGGTTTT TTGAGTGTTT AAATGAAGAG
GAGACCTTAG GATTTTCTTA CGCTCAGGTA GGACAGGAAA ATACATTTTT ATGGAATACC
ATGTATAAGG GATATGAAGT TCAAATAGAA CATATATTCA ATTTGGAAAA GGAGAAGAAG
CTTAGAGTTG AAACTTTAGC TGAAAGTGCA CTTTGGTATA AGAAGAAATA TAGATTAACT
CCACCTACTA CCTTTGGTGC TAAAAAAGAT TGGAACACTT ATAATATGAA AACTTTATGG
TATAACAGTA GGTTTTATAG AAGCAGTTTT TTATTTGAAA ATAATGTTTT AAGTATAAGA
GATATTCATT TATTTAATGA AAATTATGAA TCAAGATATT ATGATAACTA TTTAGATGAC
AATGAAAGTG TATTTGATGC ATTGCCTTTA ATGAGACCTC ATTACTGGAA AAATGAAATA
GATGAAAGAC CAAAAATAAG CTTTGTTAAA TTAAAAAGAA TTGATGTATA TGAAAAAATT
AAAGGAGGTG CCATAGACTT TAAAGTAGTT AATGAGGATA AATGCGAAAT AACATGGGAT
TTAAATCATG AGGAAAGCAT AAAAATACTT TGCTATGAAG ATAAGATAAG TATTAAATTT
AATGTGAAAG GTTCTAAAGA ATGTATGCTT TGTATAAATA CCTTACCTGT TCTTCAGGAA
TTAAATTTAA ATACTATTTT ATGTAAGCAC AATGATTTTA AATATAAAAT TTCTTTAATT
AAGGGAGAAT TCTCAGTAGA TGAAGAATCT AAGATATTAA TAATTCCAGA GGAGGGGGAA
ATACTTTTAG ATTTAAACAC TATTTGTGAA AAAACTAAGG AAAAAGAGTT CTTTACTGAT
GAATATTTAA AAAATAGAGA AGGGATAGAT GGATATGTAC CGGAATATAA AAGGTATAAG
AAAGGTAGTA AGGTTAAACT TAGAGCCTTT AGACCAATTG TAAATATAGA TACTTTACTT
ATTAATAAAC CATTTTCTCA AGAAATTCTT TTAGGAAAAA GAGATAAAAA AGGAGAAATT
AGATATACTT TAGATGGAAG TGAGCCAAAT GAGAAATCTT TGTTATATAA AGAGCCCATA
GTTGTTAATG ATAGAGCTTT TATAAAAGCT AAGGTTTTTA AAGAAGGATA CAAGCCTAGT
AATACTGTGG AAAGTAGAAT ATATGTAACT TTGCCAATAG CTAATATTAA AGGGTTAACT
AAGCCTACAG ACCACTATAT GTACAATAAA AGAGGAGTTT ATGATTTAAT AGATGGTGAA
AAGGGAAGTT TGCATTATAC TGATGGAAAA TGGCTTGGAT ATACAGAAGA TATGGAAGTA
ATAGTGGATT TAGGAGAAGT AAAAGAAATA AAAGAAATAA TGGTTGGATT TTTACAAGAC
ACAAGAGCTT GGATTTACTA TCCTAAGTTT GTAGAGTTTT ATTCTTCTGT AGATGGAGAA
GAGTTTACCT TATTAACAAG GGAAGAAAAG GATAAGAATG AAAAAAGAGA AGAAGTAGGA
AAAAAGGACA TTACATCACA AAGAGAAATT AAGACTAGGT ATATTAAAAT ATTTGCAAAG
AATGAAGATG TATGTCCAGC TTGGAGTATA ATGCCTGGAG ATGGTCCTAC CTTTATGTTT
GTTGATCAAG TTACAGTAAT ATAA
 
Protein sequence
MIKFDKKKKN NITIVNIYNF IRKTVYPSGE FVEDDFQTVV REIELIKQYG FPATYALKHD 
ALMDERFVNL IKESIDEYDE VGAWFEITEE LAKKAGVKWK GETPIDDHVH RGYSLGYSPE
DRFKMADVYM ADFKSIFGYY PKTVGSWVID IRTLTYLKEK YGVIGGAICR DQIGTDGFTL
WGGYFNQAYY PSKLNEYIPA QREEMQLDLP LFRLLGPDPI YNFEEGLREE LKGVHTLEPA
WIIGQNKEWV HWFFECLNEE ETLGFSYAQV GQENTFLWNT MYKGYEVQIE HIFNLEKEKK
LRVETLAESA LWYKKKYRLT PPTTFGAKKD WNTYNMKTLW YNSRFYRSSF LFENNVLSIR
DIHLFNENYE SRYYDNYLDD NESVFDALPL MRPHYWKNEI DERPKISFVK LKRIDVYEKI
KGGAIDFKVV NEDKCEITWD LNHEESIKIL CYEDKISIKF NVKGSKECML CINTLPVLQE
LNLNTILCKH NDFKYKISLI KGEFSVDEES KILIIPEEGE ILLDLNTICE KTKEKEFFTD
EYLKNREGID GYVPEYKRYK KGSKVKLRAF RPIVNIDTLL INKPFSQEIL LGKRDKKGEI
RYTLDGSEPN EKSLLYKEPI VVNDRAFIKA KVFKEGYKPS NTVESRIYVT LPIANIKGLT
KPTDHYMYNK RGVYDLIDGE KGSLHYTDGK WLGYTEDMEV IVDLGEVKEI KEIMVGFLQD
TRAWIYYPKF VEFYSSVDGE EFTLLTREEK DKNEKREEVG KKDITSQREI KTRYIKIFAK
NEDVCPAWSI MPGDGPTFMF VDQVTVI