Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1437 |
Symbol | |
ID | 4203995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1617074 |
End bp | 1618045 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642565991 |
Product | hypothetical protein |
Protein accession | YP_698756 |
Protein GI | 110801723 |
COG category | [S] Function unknown |
COG ID | [COG3339] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.973186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAATTT CAAATGTAGA TATAAAATTA AATTCAGATG ACTTAATGAG CTTTATTAAT GATTTTGTAA AAATTAAGGG TTTAGAAATA AAAAGCTTAA AAATAAACAA TGGTATAGAA GTAGAAGGAG TGTTTAAAAA GGTTCTTGCT TTAGGTTTTA AAGCAACTTT GAATATTTTA GGAGTAGAAG GAGATAATCT TGTTATAGAA TTTTCAAAAG CTAAACTTAT GAGTGTTGGA ATTTTAAAGC CTTTTAGAAA AATAGGTCTA AAGATAGCTT TAAAAGGTTT TAAAAATCAG GGGATCTTAG TTAAGGAGGA TAAAATACTT GTAGGTTATA AGAAAATACT AGGTAATATA CCTTTCTTAA ATTTAGATTT TAAGGAATTA AAAATTCAAG GAGAGGTTTT AAATATTGGA TTAGAAAAAA TAGATGTAGA GCTTTCAAAG ATTAAGGAAC CTGTTTTAGA AATAGAAGTG AGAGATGACA TTGAAGAAGA GGAAAAGACA GATGATTACA TAATGAGCAT TGATGTACAA AAAGTTGAGG ATATGTATAC AAGTAGCAGA GATTATGTGG TTAATCATAT TCCAGAGAAG GCTAAAGATT ATAAGGATTA TATTATGTTC TTACCAGATA TAGTAGCTTT AATATTTAGA CTTTTAAAAG ATAATAGAGT TCCTATGAAG ACTAAGGCTA TAGTAGGTGC TTCTTTAGGA TATGTAGTTT GTCCATTTGA TATATTACCA GATAAAATAC CTTTTGTAGG TGCTTTAGAT GATTTAAGTG TAATTTTCTT TGCTTTAAAT AGAATGATAA ATGATGTAGA CATAAATGTT ATATTAGAAA ATTGGCAAGG AGAAAATGAA TTTGTAGTTA TTTTAAGAAA GACTGTAGAA TTCTTTAGTG GATTTACAGG TGCTAATAAT TTAGATAATA TATATGAAGT CATAGATTCA ATAACTAATT AA
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Protein sequence | MQISNVDIKL NSDDLMSFIN DFVKIKGLEI KSLKINNGIE VEGVFKKVLA LGFKATLNIL GVEGDNLVIE FSKAKLMSVG ILKPFRKIGL KIALKGFKNQ GILVKEDKIL VGYKKILGNI PFLNLDFKEL KIQGEVLNIG LEKIDVELSK IKEPVLEIEV RDDIEEEEKT DDYIMSIDVQ KVEDMYTSSR DYVVNHIPEK AKDYKDYIMF LPDIVALIFR LLKDNRVPMK TKAIVGASLG YVVCPFDILP DKIPFVGALD DLSVIFFALN RMINDVDINV ILENWQGENE FVVILRKTVE FFSGFTGANN LDNIYEVIDS ITN
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