| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1428 |
|---|
| Symbol | |
|---|
| ID | 4204185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1607541 |
|---|
| End bp | 1608233 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 642565982 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_698747 |
|---|
| Protein GI | 110802441 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0334282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAGATGATAA TAAATTAAAA GAGATAAGTT TCTTTTCTGG ACTTAATGAT
GAAACATTAA AATATATGGA GAAAAATTCT AAAGTTTTAA AAAAGAAAAA GGGAGAGCAC
ATCTTTAGAG ATAAAGATAA GATTCAGGAT ATTTTTATTG TTTTAAAAGG AAAAGTAACT
TTGTATAAGA TGAATGAATA TGGACAAAAG AGAATAGTTT ATATACTTGG AGAGGAAAGT
TTTTTAAATG AAGTAATAGT TGATGACCTT CCAGCTTCAA TAAATGGAGA AGTTTTTGAA
AACTCAATAA TATTTAGTAT AGATAAAAAT AAGTTATTAC ATATAATGAG TAAAGATTTT
GAACTTACAA AGATTGTTTT AAATGAAATG AGCAAGAAGG TAAGAAGATT ATATAGACAA
ATGAAAAATG TAACTCCAAT AAAATTAGAA AAAAGAGTAG CAGCAAAGCT TTGGAAGTTA
AGTAAGGATT ATGGAAAAGA AGTACCAGGT GGTACACTTA TTGATTTAGA TATAAGCATA
ACTTACTTAG CAGATATGTT TGGTTCTCCG AGGGAAAGTG TATCTAGAGC TATTAAAACT
TTAAGAGATG AAAATCTAAT AATCAAAGAA AACAAAAAGA TTATAATACC TGATAGAGAA
AGAATTGCTG CATATTTTAA ATCATTAATA TAA
|
|---|
| Protein sequence | MKKLDDNKLK EISFFSGLND ETLKYMEKNS KVLKKKKGEH IFRDKDKIQD IFIVLKGKVT
LYKMNEYGQK RIVYILGEES FLNEVIVDDL PASINGEVFE NSIIFSIDKN KLLHIMSKDF
ELTKIVLNEM SKKVRRLYRQ MKNVTPIKLE KRVAAKLWKL SKDYGKEVPG GTLIDLDISI
TYLADMFGSP RESVSRAIKT LRDENLIIKE NKKIIIPDRE RIAAYFKSLI
|
|---|
| |