| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1421 |
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| Symbol | hemD |
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| ID | 4206042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1600005 |
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| End bp | 1601483 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565975 |
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| Product | uroporphyrinogen-III methyltransferase/synthase |
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| Protein accession | YP_698740 |
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| Protein GI | 110803870 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.16426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA AAGCATATAT AATAGGGGCA GGTCCTGGAG ATGAAGAGTT ATTAACACTT
AAAGCAATAA ATGCATTACA AAAATGCACA GCTGTCTTAT ATGATAGATT AGTTGGAAAC
AATATACTTA ATTACTTAAA TGATGACTGT GAGATTTACT ATTGTGGAAA AGAGCCAGGA
TGTCATTATA AAACACAGGA AGAGATAAAT GAAAGTATAG TTGAACTTGC TAAAAAAGGT
CATATTGTTG GTAGAGTAAA AGGTGGAGAT CCCTATGTTT TTGGAAGAGG TGGAGAAGAA
GTATTAGCCT TAGTAGAAGA AAACATACCT TTTGAAGTTA TTCCAGGGGT TACTTCACCT
ATTTCTGTTT TAAATTATGC AGGGATACCA ATAACACATA GAGGATTAGC ACAGAGTTTT
CATATTGTAA CAGGAATGTC AGCAAGAACT TTAAATGTAA ATTGGAAAGC TTTATCAAAA
GAAAATGGAA CCTTAGTATT TATGATGGGG CTTTCAAATT TAGAGACAAT TGTTGAGAAA
CTTTTAGAAA ATGGTAAAGA TATAGAAACT CCTTGTGGAG TAGTAATGAG AGGAACAACT
TCAAAGCAAA GAAAGGTTAT TGGAACATTA GAAAATATAT GTAAAAAGGT TAGAGAAGCT
AAGTTAGAGT CACCTTGTAT AATAGTTGTT GGTGATGTTG TTTCATTAAA TGAAAAACTT
TCATGGTATG AAAAATTACC TCTATTTGGA GCTAATATTT GTTTAACAAG ATCTAAGGAA
CAATCTAAAG AGATTAAGTG GAAATTAAAA GAGTTAGGTG CAGAAGTAAC AGAAATAAAC
TCTATAAAAA TAAAAGAAAC TTCAGAAAAT TTAGATGAAT ATATTAATAC TTTAGAAAAA
TATGATCATA TAGTATTTAC TTCAGTAAAT GCTGTTAATG TATTCTTTGA TTATTTAGTG
AAAAAAAGAG TTGATATAAG AAAAATAAAA GCAGATTTTG CTGTACTAGG AAAAGCAACT
AAAAAAGCTT TAATAGCTAG AGGAATTGTA CCAAGCATAA TGGCTCATTC ATTTACAGCG
GAAGGTTTAT TTGAAGTTTT AAAAGATAAT ATTAAAGAAG GAGAAGAAGT CTTAATTCCA
TGCTCTTCTT TAAGTAGAGA ATATTTGTTT GATAATTTAG CTTCTTTAGG AGCAAAATGT
CATAGAGTTA ATATTTATGA TACTATATGC GGAGATGTTA AAAATCCAAG AGCTTTCAAG
GAAGTTGATA TGGTATTATA CACAAGTCCT TCAACGGTTA AAAACATGAT TGATATGATT
GGACTTGAAT CTCTTAAAGA GAAAGTAAGT ATAGCTATAG GACCTATAAC CTTAAAAGCT
TTAAATGAAA GTGGAATTGA AGGGAAAATG TGCAAAACAC ATTGTGGGGA TGGATTTTTA
AGTGAAATTG AAGGTATATG GCAAGAGGTT AAAAAATAA
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| Protein sequence | MSKKAYIIGA GPGDEELLTL KAINALQKCT AVLYDRLVGN NILNYLNDDC EIYYCGKEPG
CHYKTQEEIN ESIVELAKKG HIVGRVKGGD PYVFGRGGEE VLALVEENIP FEVIPGVTSP
ISVLNYAGIP ITHRGLAQSF HIVTGMSART LNVNWKALSK ENGTLVFMMG LSNLETIVEK
LLENGKDIET PCGVVMRGTT SKQRKVIGTL ENICKKVREA KLESPCIIVV GDVVSLNEKL
SWYEKLPLFG ANICLTRSKE QSKEIKWKLK ELGAEVTEIN SIKIKETSEN LDEYINTLEK
YDHIVFTSVN AVNVFFDYLV KKRVDIRKIK ADFAVLGKAT KKALIARGIV PSIMAHSFTA
EGLFEVLKDN IKEGEEVLIP CSSLSREYLF DNLASLGAKC HRVNIYDTIC GDVKNPRAFK
EVDMVLYTSP STVKNMIDMI GLESLKEKVS IAIGPITLKA LNESGIEGKM CKTHCGDGFL
SEIEGIWQEV KK
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